Odobenus rosmarus divergens (Pacific walrus): 101363225
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Entry
101363225 CDS
T05148
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03082
ATP-dependent chromatin remodeling
oro04714
Thermogenesis
oro05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101363225 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101363225 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101363225 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oro03021
]
101363225 (SMARCC2)
03036 Chromosome and associated proteins [BR:
oro03036
]
101363225 (SMARCC2)
Transcription machinery [BR:
oro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101363225 (SMARCC2)
Chromosome and associated proteins [BR:
oro03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101363225 (SMARCC2)
PBAF complex
101363225 (SMARCC2)
GBAF(ncBAF) complex
101363225 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
101363225
NCBI-ProteinID:
XP_004401718
UniProt:
A0A2U3W1A7
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPAKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARTEGQATEEKKEPKEPREGVGAAEEETKEKTSEVPKKDEERGKQGDSEKE
SEKSDGDPIVDPDKEKEPKEGQEEVLKDVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPAGTAGPPALHSLAMA
PASVAPAPAGGGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPPGVAPPGPHGPS
PFPNQPTPPAMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHQHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgaggctctggctcggcaagaactacaagaagtatatccaa
gctgaaccacctaccaacaagtccttgtctagcctggttgtacagttgctacagtttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcacaaaactgccgatcaaatgt
ttcttagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaagttc
aagagtgaccagggatggcggcgttacgatttccagaatccgtcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataactgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaagataagaacaatgcctcccatgttgtgtatcct
gtcccagggaacttggaagaagaggaatgggtacgaccagtcatgaagcgggataagcag
gttcttctgcactggggctactatcctgacagttacgacacgtggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcacgcaaag
tggattctggacacagacactttcaatgaatggatgaacgaggaagactatgaggtaaat
gatgacaaaagccccgtctcccgccgaaagaagatttcagcgaagacgctgacggatgag
gtgaacagcccagattcagatcgacgggacaagaaaggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccggaagccaagaagaaaaacgccaagaaaggtccc
tcgacaccttacaccaagtcgaagcgtggccacagagaggaggagcaagaagacctgaca
aaggacatggatgagccttcaccagtccccaatgtagaggaggtgacgttgcctaaaaca
gtcaacactaagaaggattcagagtccgcgccagtcaaaggaggcaccatgactgacctg
gatgaacaggaagatgaaagcatggagaccacgggcaaggatgaagatgaaaacagtacg
gggaacaagggggagcagacgaagaatccagacctacatgaggacaacgtgactgaacag
acccaccacatcatcattcccagctacgccgcctggtttgactataatagtgttcatgcc
attgagcggagggctctccccgagttctttaacggcaagaacaagtccaagactccagaa
atctacctggcttatcgaaacttcatgattgacacgtaccggctgaacccccaagagtat
ctcacctccactgcctgccgcaggaacctggctggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgcagagagtcgacca
accccgatggggcctccgcccacctctcacttccatgtcttggcagacacgccatcaggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaagccg
acagacatgcagaactttggcctgcgcacagacatgtacacaaagaagaacgtccccgcc
aagagtaaagctgcggccagtgccactcgagagtggacggaacaggagacgctgctcctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcctatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggccctagaggagttctccaagatgaaggaggaagtgcccaca
gccttggtggaggcccacgtccggaaagtggaggaggcagccaaagtgacgggcaaggca
gacccggcctttggtctggagagcagcggtatcgcaggaaccacctctgatgagcctgag
cggattgaggagagcgggacggacgaggcacggacagagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgccgaagaagaaacaaaggagaag
accagcgaggtccccaagaaggacgaagagagagggaagcaaggtgacagcgagaaggag
tcagagaagagcgacggggaccccatagttgacccggacaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggacgtggtggagtcggagggggagaggaagacgaaggtg
gagcgggacatcggtgagggcaatctgtccaccgccgccgctgccgccctggccgccgcc
gccgtgaaggccaagcacctggccgccgtggaggagaggaagatcaaatcgctggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaagagttg
gagaccatcatggaccgggagcgagaggcactggagtatcagaggcagcagctcctggcc
gatagacaagccttccacatggagcagctgaagtacgcggagatgagggcccggcagcag
cacttccagcagatgcaccagcagcagcagcagcccccgccagccctgccgccaggctcc
cagcccgtcccgcccgcgggcactgccgggccgcccgcgcttcacagcctggctatggct
ccagcctccgtcgcccctgctcccgctggcggtggggctccccccggaagcttgggcccc
tctgaacagattgggcaggcagggtcagccgcggggccacagcagcagcaaccagctgga
gccccccagcctggggcagtcccaccaggggtagccccccctggaccccatggcccctcg
ccgttccccaaccaaccaactcctcccgcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcccgctccatccatcatcccatttggtagtctagccgactccatcagtattaacctg
ccccctcctcctaacctgcatgggcatcagcaccatctcccgtttgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggtacccccctgcctccagaccccacggccccaagcccaggcacagtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
