Odobenus rosmarus divergens (Pacific walrus): 101364499
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Entry
101364499 CDS
T05148
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101364499 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101364499 (PRPF40B)
Spliceosome [BR:
oro03041
]
Complex A
U1 snRNP components
U1 related factors
101364499 (PRPF40B)
Complex B
101364499 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
DUF4936
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
101364499
NCBI-ProteinID:
XP_004400907
UniProt:
A0A2U3VZC5
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVP
PMLPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVW
EKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAG
KQPQPQILQPQPPQPQPEPPPGPPGPTPMPLGLLEPEPGGSEDCDTSEAAQPVEQGFLQQ
PEEGPSSAAGQHQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQ
AMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERM
TSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSI
LDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERE
RARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTP
LDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNI
KLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCD
SAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEE
ELPPPPLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAK
KPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELPNRSPGFGIKKE
KTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcatgccccctccaggaatccccccaccctttcctccgatggga
ctaccccccatgagtcagagaccaccagccatccccccgatgccacctggcatcatgccc
ccaatgctgccaccaatgggggcgccaccgccactcacgcagataccaggaatggtaccg
cccatgctgccagggatgctgatgccagcggtgcctgtcaccgcagcgacggctccgggt
gcggacacagccagctctgctgtggctgggacaggccctccgagggccctgtggagtgag
catgtggcccctgacgggcgcatctactactacaacgcagacgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcagagttgctgctgtcccagtgtccctggaaa
gagtacaagtctgacacgggcaaaccttactactataacaaccagagtaaggagtctcgc
tggacccggcccaaggacctggatgacctggaggctctagtcaaacaagaggcggcaggg
aagcagccccagccccagatactgcagccgcagccacctcagccccagcctgagcccccg
cctgggccgcctggccccacccccatgcccctgggccttctagagcctgagccaggtggg
agtgaagattgcgatacgtcagaggctgcccagcctgtggagcaggggtttctgcagcag
ccggaggagggccccagcagtgctgctggacagcatcagccaccacagcaggaggaagag
gaatcaaagccagaaccagagaggtctggcctcagttggagcaaccgggagaaggcaaag
caggccttcaaggagctgctgagggacaaggctgtcccctccaatgcctcgtgggaacag
gccatgaagatggtggtcaccgacccccgttacagtgccttgcccaagctgagtgagaaa
aagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggaggaggcccgg
ctaagggccaaggaggccaagcagaccttgcagcatttcctggagcagcacgaacgcatg
acctctaccacccgctaccggcgggcagaacagacctttggggagctggaggtgtgggct
gtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaag
aaggagaaggaacaggccaagcagctccggcgccgcaacatccaggccctgaagagtatc
ctggatgggatgagtagtgtcaacttccaaactacatggtcccaggctcagcagtacctc
atggataaccccagctttgctcaggaccaccagctgcagaacatggacaaggaagatgca
ctgatctgcttcgaggagcatatccgagctttggagagggaggaggaggaggagcgggag
cgggcccgccttcgggagcggcgtcagcaacgcaagaaccgggaggccttccagaccttc
ctggacgagctgcacgagacagggcagctgcactctatgtccacctggatggagctgtac
ccagcggtcagcactgatgtccgctttgccaacatgctgggccagccgggctccacccct
ctggacttgttcaagttctatgtggaggagttgaaggcacgattccatgatgagaagaag
atcattaaggacatccttaaggaccggggcttctgcgtggaggtgaacacagcctttgag
gacttcgcccacgtcataagctttgacaagagggcggctgcgctggacgcaggcaacatc
aagctgaccttcaatagtttgctggagaaagcagaggcgcgggagcgagagcgggagaag
gaggaggcgcgaaggatgcggcgcagggaagctgccttccgaagcatgctgaggcaggcc
gtgcctgccctggagctgggcactgcctgggaagaggtccgtgagcgctttgtgtgcgac
tcagcctttgagcagatcaccctggagtcggagcggatccggctcttccgggagttcctg
caggtactggagactgaatgccagcacctccacaccaaaggccgaaaacacggcagaaag
ggcaagaagcaccatcgaaagcgttcccactcgccctcaggctctgagtcggaagaagag
gagctgcccccgccacctctccgaccccccaagcggagaaggcggaacccctcggagtca
ggctctgagccctcttcctcccttgattcggttgaaagtgggggtgctgcccttggagga
cggggctccccatcttctcgccttctccttggatcagatcatggccttcggaaagccaag
aaaccaaaaaagaaaactaagaagagaagacacaagtcgaacagtcctgagagcgagaca
gaccctgaggagaaagctggcaaggagagtgatgagaaagaaccagaacaggacaaggac
agggagctccggcgggcagaactcccgaaccgctccccaggttttggaatcaagaaggag
aagacgggctgggacacgtcggaaagtgagctgagcgagggtgagctggaaaggcggcgg
cggacgctcctgcagcagctggatgaccaccagtga
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