Odobenus rosmarus divergens (Pacific walrus): 101378091
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Entry
101378091 CDS
T05148
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101378091 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oro03000
]
101378091 (SOX17)
Transcription factors [BR:
oro03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101378091 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
101378091
NCBI-ProteinID:
XP_004410083
UniProt:
A0A2U3WM72
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAATLGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYPQASDYAGPPEPPVGPMHSRLGLEQAGPAMPGHVAPSSALQLYYNAI
SSPAAGGGRGFSMPPQQHPPGPGQPSPPPEALPCRDGADPNQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagacccgcagcgcgctg
cccgcggtgatggccgggctgggcccctgtccctgggccgagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggcggcggcgagcagcggggcgccggcgggggcggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgctttcatggtgtgggctaag
gacgagcgcaagcgtctggcgcagcagaacccggacctacacaacgccgagttgagcaag
atgttgggcaagtcgtggaaagcgctgaccctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
aggcgcaagcaggtgaagcgactgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccgcaggccgccacgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttcccggagcagggcttcccggcgggcccgccgctgctgcccccgcacatgggc
ggccactaccgcgactgccagggactaggcgcgcccccgctcgacggctacccgctgccc
acgccggacacgtccccgctcgacggcgtggagccggatcccgccttcttcgccgcgccg
ctgcccggggactgtccggcggccggcccctacagctatccgcaggcctcggactacgcg
gggcccccggagccgcccgtcggccccatgcactcccggctcggcctggagcaggcgggc
ccagcaatgccgggccacgtggcgccctccagcgccctgcagctgtactacaacgcgatt
agctcgccggcggcgggcggcgggcgcggcttctctatgccgccgcagcagcacccaccc
ggcccggggcagccgtcgccccctcccgaggccctgccctgccgggacggcgcggaccca
aaccagcccgccgagctcctcggggaggtggaccgcacggaatttgaacagtatctacac
tttgtgtgcaagcccgagatgggtctcccttaccagggacatgactctagtgtgaatctc
ccagacagccacggggccatttcctcggtggtgtccgacgccagctctgcggtatattac
tgcaactatcctgacgtttga
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