Ornithinimicrobium ciconiae: FNH13_08635
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Entry
FNH13_08635 CDS
T06094
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
orz
Ornithinimicrobium ciconiae
Pathway
orz03030
DNA replication
orz03430
Mismatch repair
orz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
orz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNH13_08635
03430 Mismatch repair
FNH13_08635
03440 Homologous recombination
FNH13_08635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orz03032
]
FNH13_08635
03400 DNA repair and recombination proteins [BR:
orz03400
]
FNH13_08635
Enzymes [BR:
orz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNH13_08635
DNA replication proteins [BR:
orz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNH13_08635
DNA repair and recombination proteins [BR:
orz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNH13_08635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
RNase_H_2
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
QDO88401
UniProt:
A0A516GA41
LinkDB
All DBs
Position
complement(1897487..1899253)
Genome browser
AA seq
588 aa
AA seq
DB search
MQMVQETFDDLGVPLSDVTFVVVDLETTGGSPADCGITEIGAVKVRGGEVLGEFQTLVRP
STPIPAFITVLTGISNAMVADSPRIDAALPAFLEFARGAVLVAHNAGFDISFLKAAARQT
GHPWPGFAVLDTVRLARQLVHRDEAPNHKLSSLATLFGASTTPDHRALHDARATVDVLHG
LMERVGNLGVHTLEELQSYTSRVTTAQRRKRFLADAMPSAPGVYVFKDSSGEPLYVGTAV
DIRRRTRTYFTASESRRRMAEMVGIAESITPIVCATQLEAQVRELRLIAEHKPRYNRRSR
HPEKALWVKLTVEPFPRLSIVRQVRGDGAHYAGPFGSRKSAEAAVFAVHEVVPLRQCTQS
LSARSRKSPCVLFEMGRCGAPCIGEQTSEEYADVASQAATALIGDGRDLLSSLRAKLDTL
AEQERFEDATSLRDRMLALVRATARAQRLAPLSSAPEIVAARRRDAGGWEVVCVRYGRLA
GTTVTPRGADPMPFIEAVRATAEVVPEPTAPAPAAHPEEAELVLKWLEAPGTRLVTMDGE
WTCPVGGAGAARAQLEPMARRWSDFSEPWGDVAPSPLERPPGALRAAH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggtgcaggagacattcgacgacctgggggtccccctgtcggatgtcacattc
gtggtcgtcgacctcgagacgactggcggctcccccgctgactgcggcatcaccgagatc
ggtgctgtgaaggtgcgcggcggtgaggtcctcggtgagttccagacgctggtccggccg
agcaccccgatcccggcattcatcaccgtgctcaccggcatctccaacgcgatggtggcg
gactccccgcgcatcgacgcggcgctgccggccttcctggagttcgcgcgcggcgcggtc
ctggtggcccacaacgccggcttcgacatctccttcctcaaggcggccgcgcggcagacc
ggccacccgtggccggggttcgcggtcctggacacggtgcgcctggcccgccaactggtc
caccgtgacgaggcgcccaaccacaagctgtccagcctggccaccctcttcggagccagc
accaccccggaccaccgtgcgctgcacgacgcccgcgcgaccgttgacgtgctgcacggg
ctcatggagcgggtgggcaacctcggggtccacaccctggaggagctgcagagctacacc
agccgggtgaccactgcccagcgccgcaagcgcttcctggcggacgcgatgccctcggcc
cccggggtctatgtcttcaaggacagcagtggcgagccgctctatgtcggcacggccgtc
gacatccgccggcgcacccgcacctacttcaccgcctcggagtcgcggcgccgcatggcg
gagatggtgggcatcgctgagtcgatcaccccgatcgtctgcgcgacccaactggaggcg
caagtgcgtgagctgcggctgatcgctgagcacaagccgcgttacaaccgccgctcgcgc
cacccggagaaggcgctgtgggtcaagctgaccgtcgagccgttcccccgactgtcgatc
gtgcgccaggtccgtggcgacggggcgcactacgccggtccgttcgggtcccgcaagagc
gccgaggccgccgtgttcgcggtgcacgaggtggtgcccctgcgccagtgcacccagtcc
ctctcggcgcgctcgcgcaagagcccgtgtgtcctcttcgagatgggacggtgcggcgca
ccctgcatcggggagcagaccagcgaggagtatgccgatgtcgccagtcaggctgccact
gccctgatcggagatggccgggatctgctctcatcgctgcgggccaagctggacaccctg
gccgagcaggaacggtttgaggacgccacgagcctgcgcgaccggatgctcgccctggtc
cgggccaccgcccgggctcaacgcctggcaccgctgtcctccgcccccgagatcgtcgcg
gcccgccgccgggatgctgggggctgggaggtggtgtgcgtgcgctatggccgactcgcc
gggaccaccgtgaccccgcgcggcgccgacccgatgcccttcatcgaggccgtgcgggcc
accgccgaggtggtgccggagccgacggccccggctccggctgcccacccggaggaggcc
gagctggtgctgaagtggctggaggccccgggcaccaggctggtcacgatggacggagag
tggacctgcccggtcggtggcgccggcgcggcgcgggcccagttggagccgatggcgcgg
cgctggagcgacttctccgagccctggggcgacgttgcgccctctcctctggagcgcccg
ccgggggcgctgcgtgccgcccactag
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