Ornithinimicrobium ciconiae: FNH13_14040
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Entry
FNH13_14040 CDS
T06094
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
orz
Ornithinimicrobium ciconiae
Pathway
orz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FNH13_14040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orz03019
]
FNH13_14040
03016 Transfer RNA biogenesis [BR:
orz03016
]
FNH13_14040
Enzymes [BR:
orz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FNH13_14040
Messenger RNA biogenesis [BR:
orz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FNH13_14040
Transfer RNA biogenesis [BR:
orz03016
]
Prokaryotic type
tRNA degradation factors
FNH13_14040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH_2
KhpA-B_KH
KH_5
Motif
Other DBs
NCBI-ProteinID:
QDO89312
UniProt:
A0A516GCS7
LinkDB
All DBs
Position
complement(3053419..3055992)
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AA seq
857 aa
AA seq
DB search
MEGPEITFAEAVIDNGSFGTRTVRFETGRLAKQAGGSVTAYLDDETMLLSTTTASKHPKD
HFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTDAILTCRLIDRPLRPTFAKGLRNEVQ
VVITVLSLNPDHQYDVLAINAASLSTQISGLPFSGPIGGVRISLIDDQWVAFPNFSDAER
STFDMVVAGRVVGETTDGNGNAVPDVAIMMVEAESTEATWDLVKTLGKTAPTEEVVAQGL
EAAKGFIATLCKAQSELASSAAKEVQEFPRFLDYQDDAYAAVEGEVKTDLSAALQIAGKA
EREDRISEIKTAMKGKLLGLRWDAAGDSDVTEDAPFAGRDKELDAAYRAVQKELIRERII
TEKIRIDGRGLADIRALSAEVEVIPRAHGSAIFERGETQIMGVTTLNMLRMEQQLDTLSP
VTRKRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALMPVLPTREEFPYAIRQVSE
ALSSNGSTSMGSVCASTMSLLNAGVPLRAPVAGIAMGLVSVEVDGKTEYAALTDILGAED
AFGDMDFKVAGTREFVTAIQLDTKLDGIPASVLGGALTQAHDARLHILDVMNEAIDVPDE
MSPYAPRVIAVKVPVDKIGEVIGPKGKMINQIQEETGADISIEDDGTVYIGATDGPSAEA
ARAAVNAIANPQMPEIGERFLGTVVKTTTFGAFISLLPGKDGLLHISEIRKLVGGKRIDA
VEDVMSVGQKVQVELKEIDPRGKLSLAAVVADNGDDTAAATAEAPVLDEGAATPEAPAHV
PAAPEDAPAEEAQAPVETDGDTQGDADGDDSDNDSDNDSEGRDRPRRNRRRRGGRGRGGN
DSGGDNAGGDDSGNSED
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagagatcacattcgccgaagccgtcattgacaacggttcgttcggcacc
cgcaccgtccggttcgagaccgggcggctggccaagcaggccggcggatccgtcaccgcc
tatctggatgacgagaccatgctgctgtcgaccacgacggccagcaagcacccgaaggac
cacttcgacttcttccccctgacggtggatgtcgaggagcgcatgtatgccgcgggcaag
atccccggcagcttcttccgtcgcgagggtcgcccctcgaccgacgccattctcacctgc
cggttgatcgatcggccgctgcgcccgaccttcgccaagggcctgcgcaacgaggtccag
gttgtcatcaccgtcctgtccctgaacccggaccaccagtacgacgtgctggcgatcaac
gccgcgtcgctgtccacccagatctcgggcctgccgttcagcggccccatcggtggtgtc
cggatctcgctgatcgacgaccagtgggtcgccttccccaacttcagtgatgccgagcgc
tccaccttcgacatggtcgtggccggccgcgtcgtgggtgagaccacggacggcaacggc
aatgctgtcccggatgtcgcgatcatgatggtcgaggccgagtccaccgaggccacctgg
gacctggtcaagaccctgggcaagaccgcgccgaccgaggaggtcgtcgctcagggcctg
gaggccgccaagggcttcatcgccaccctgtgcaaggcacagtccgagctggcctcttcg
gccgccaaggaggtgcaggagttcccgcgcttcctggactaccaggacgacgcctacgcc
gctgtcgagggtgaggtcaagacggacctgtccgccgcgctgcagatcgcgggcaaggct
gagcgtgaggaccgcatctccgagatcaagacggccatgaagggcaagctgctcggcctg
cgctgggacgccgcaggcgactcggatgtcaccgaggacgcgccgttcgccggtcgcgac
aaggagctcgacgcggcctaccgcgccgtgcagaaggagctgatccgcgagcggatcatc
accgagaagatccgcatcgatggtcgcggcctggccgacatccgtgcgctcagcgccgag
gtcgaggtcatcccgcgcgcccacggctcggccatcttcgagcgcggcgagacccagatc
atgggcgtcaccaccctcaacatgctgcgcatggagcagcagctggacaccctctccccg
gtgacccgcaagcgctacatgcacaactacaacttcccgccctacagcaccggtgagacc
ggtcgcgtgggctccccgaagcgtcgcgagatcggtcacggcgcgctcgccgagcgtgcc
ctgatgccggtcctgccgacccgcgaggagttcccctacgcgatccgtcaggtctccgag
gccctgagctccaacggctcgacctcgatgggctcggtctgcgcgtccacgatgtcgctg
ctcaacgccggtgtgccgctgcgcgccccggtcgcgggcatcgcgatgggcctggtctcc
gtggaggttgacggcaagaccgagtatgccgcgctgaccgacatcctcggtgccgaggat
gccttcggtgacatggacttcaaggttgccggcacgcgggagtttgtcaccgccatccag
ctcgacaccaaactggacggcatccccgcctccgtgctcggtggtgcgctgacccaggcg
cacgacgcgcgtctgcacatcctggacgtcatgaacgaggccatcgacgtgccggacgag
atgagcccctacgctcctcgcgtcatcgcggtcaaggtccccgtcgacaagatcggtgag
gtcatcggcccgaagggcaagatgatcaaccagatccaggaggagaccggcgccgacatc
tcgatcgaggacgacggcaccgtctacatcggcgccaccgacggcccctcggccgaggca
gctcgcgcggcggtcaacgcgatcgccaacccgcagatgcccgagatcggtgagcgcttc
ctgggcaccgtcgtgaagacgacgaccttcggtgcgttcatctcgctactcccgggcaag
gatgggctgctgcacatctccgagatccgcaagctcgtcggcggcaagcgcatcgacgcc
gtcgaggacgtcatgtccgtgggccagaaggtccaggtcgagctcaaggagatcgacccg
cgcggcaagctctcgctggctgctgtggtcgcggacaacggtgacgacaccgctgccgcg
acggccgaggctcccgtgctcgacgagggtgccgccaccccggaggctccggcgcacgtg
ccggccgctcccgaggacgcaccggcggaggaggcccaggctccggtcgagaccgacggc
gacacccagggtgacgccgacggtgacgactccgacaacgactccgacaacgactccgag
ggtcgggaccgcccgcgccgcaaccgccgccgtcgcggtggccgtggccgtggtggcaac
gactccggtggcgacaacgctggtggcgacgactcgggcaactccgaggactga
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