Oryza sativa japonica (Japanese rice) (RefSeq): 107276891
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Entry
107276891 CDS
T01015
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
osa03110
]
107276891
Chaperones and folding catalysts [BR:
osa03110
]
Heat shock proteins
HSP100
107276891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_16
AAA_22
AAA_7
Sigma54_activat
bpMoxR
nSTAND3
IstB_IS21
AAA_28
ATPase_2
AAA_18
NACHT
AAA_25
DNA_pol3_delta2
Zeta_toxin
RsgA_GTPase
NB-ARC
Motif
Other DBs
NCBI-GeneID:
107276891
NCBI-ProteinID:
XP_015623201
LinkDB
All DBs
Position
2:11357773..11363874
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AA seq
735 aa
AA seq
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MHSDIIRSTPFTHPSQPWRGKPTAAAATRNLLLLPAAMPHRTSKMRRLPRTRSRRRTALH
RRPPPLPPAIIIHKDPPPPPPPRQPAAAKGTLDAFGRDLTAEAANADPVVGREEEIDRVV
CILSRKSKNSAVLVGAAGVGKTAIAEGLAQRIARGEVSGVLEGARVVELNVAAMISGTSY
RGTFEERMTGVIAEAEAEADAAAGKVVLFVDEIHMLLGAGRVSGGCIDASNMLKPALARG
RVRCLGATTHDEYHRYMVRDAAFERRFQKVHVAEPSVDDTVAILRRLKPSYQDHHXVDIQ
DAALVAAAKLSGRYIPARHFPDKAIDLVDEACATARLLMDRRKKKQAQAAVAPKDENVGP
DHIAQWTGIPVASLGEDERKKLLELPQLLHRRVIGQDEAVGAVAEAVVRSRSGLGNPNQP
SGSFLFLGPTGVSKTELAKALAEQLFGNAKLLVRIDMSEYVNASSVTRLIGSAPGTNGYD
KGGQLTELVRCRPYSVVLFDEVEKADAAVFNVFLQILDDGRLTDGQGRTVDFTNTIIIMT
SNLGAQHLADAAAADASHKDDATEAAAAAAKQRVLADVQRHFRPELISRLTEMVVFRPLS
GEQLRKVARLQLRGMAARLAEKGIGLDVANAALDVVLARSSDQVRAYGARPIKRCLEKDV
MTRISKMVVQEEADDDCYVTVEADQGKEELVFTVDKQADAEENDAAAASSSSSAAGKKRK
RRPPARYLVVIDDDE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgatataatcagaagcactcctttcactcacccgagccaaccatggcgaggc
aaaccaacggcggcggcagcaacaagaaaccttctactgctgccggcggcgatgcctcac
cggacaagcaaaatgcgccgcctcccgaggacaagaagccgccgccggacggcactgcac
cgtcgcccaccacccctgccaccggcaataataatccataaggatcctccgccgccgccg
ccgccgcgacagccggcggcggcgaagggcacgctggacgccttcggccgcgacctcacc
gcggaggcggcgaacgccgaccccgtggtggggcgcgaggaggagatcgaccgcgtggtc
tgcatcctctcccgcaagtccaagaacagcgccgtgctcgtcggcgccgcgggcgtcggg
aagacggcgatcgccgagggcctcgcgcagcgcatcgcccgtggcgaggtgtccggcgtc
ctggagggggcgcgcgtggtggagctcaacgtcgcggcgatgatctccggcacctcgtac
cgcggcacgttcgaggagcgcatgacgggggtgatcgccgaggcggaggcggaggccgac
gcggccgccgggaaggtggtgctgttcgtggacgagatccacatgctcctcggcgccggc
cgcgtctcgggcggctgcatcgacgcctccaacatgctgaagccggcgctggcgaggggc
cgcgtccggtgcctcggcgccaccacgcacgacgagtaccatcggtacatggtgagggac
gccgcgttcgagcgccggttccagaaggtgcacgtcgcggagcccagcgtggacgacacc
gtcgccatcctccgccggctcaagccctcgtaccaggaccaccacngcgtggatatccag
gacgccgccctcgtcgccgccgccaagctctccggtcgctacatcccagcgaggcacttc
ccggacaaggcgatcgacctggtcgacgaggcgtgcgcgacggcgaggctgctgatggat
cgccggaagaagaagcaggcgcaggcggcggtggcgcccaaggacgaaaacgtcggcccc
gaccacatcgcacagtggacgggcatcccggtggcgagcctgggggaggacgagaggaag
aagctgctcgagctgccgcagctgctgcaccgtcgcgtgatcgggcaggacgaggcggtt
ggcgccgtcgccgaggcggtggtgcggtcgcggtcgggactcggcaacccgaaccagccg
tcgggctccttcctcttcctcggcccgaccggcgtcagcaagacggagctcgccaaggcc
ctcgccgagcagctgttcggcaacgccaagctgctcgtccgcatcgacatgtccgagtac
gtcaacgccagctccgtcactcgcctcatcggctccgctccagggacgaacgggtacgac
aagggcgggcagctgaccgagctggtgcggtgtcggccatacagcgtggtgctgttcgac
gaggtggagaaggcggacgccgccgtgttcaacgtcttcctccagatcctcgacgatggg
cggctcaccgacgggcagggccgcaccgtcgacttcaccaacaccatcatcatcatgacc
tccaacctcggcgcgcagcacctcgccgacgccgccgccgccgacgccagccacaaggac
gacgccacggaggccgccgccgccgccgccaagcagcgcgtcctcgccgacgtgcagagg
cacttccggccggagctcatcagccggctgacggagatggtggtgttccggccgctgtcc
ggcgagcagctgcggaaggtggcgaggctgcagctccgtggcatggccgcgcgcctcgcc
gagaagggcatcggcctcgacgtcgccaacgcggcgctcgacgtcgtgctggcgcggtcg
agcgaccaggtgcgggcgtacggggcgcggccgatcaagcggtgcctggagaaggacgtg
atgacgaggatctccaagatggtggtgcaggaggaggcggacgacgactgctacgtcacc
gtcgaggcagaccaggggaaggaggagctcgtgttcaccgtcgacaagcaggcagacgca
gaagagaacgacgcggcggcggcgtcgtcttcgtcgtcggcggcggggaagaagaggaag
cggaggccgccggcgaggtatctcgtcgtgattgacgacgacgaatag
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