Oryza sativa japonica (Japanese rice) (RefSeq): 4330100
Help
Entry
4330100 CDS
T01015
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
4330100
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4330100
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
4330100
Protein phosphatases and associated proteins [BR:
osa01009
]
HAD phosphatases
Fcp/Scp phosphatases
4330100
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
4330100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
4330100
NCBI-ProteinID:
XP_015626278
UniProt:
Q0DZ88
Q6H5U8
LinkDB
All DBs
Position
2:25626748..25636041
Genome browser
AA seq
940 aa
AA seq
DB search
MIRSMVYFGNTSIGEVEVWPSGDASLAAAAWAREIRVDRLSPPSERCQPLAVMHTVAVGA
RCLVMESRLPKAADEPPQPLVAMHAACLKENKTAVVPLGEEELHLVAMTSRRNLTNHACF
WGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQR
INGMIAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPVIRLQE
KNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLL
DPDSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVH
VVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEI
PSAPDVGNYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVM
PVLPGQNFVSSSVAPVAPSLGMVPLSNNQGPPPFTQPVAQLSLSDPLQGSPAREEGEVPE
SELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMNPNNLNR
GSAGFPLESETMHYDKKQLPHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQNHA
PSRYRSFPGEELATRHVSSSQRNNQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRSAL
CDTADLQFSIEVWIVGEKVGEGIGRTRKEAQCQAAEISLRNLANKYLSSDPNKMTDMKEN
GFGSNTNIFGYPGNSRDDVLPIASTSEETRFVKMGENNSRKAGGSIAALKELCTAEGYNL
VFQARTSPDSSVGKEAYAEVEVCGQILGNGVGITWEDAKLQAADEALGMLRSMLGPLAQK
RSSSPRSLAPSFDKRFKPDFPRAVQRVPYGRYSRIEGHVP
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtcgatggtatatttcgggaacacctccatcggcgaggtggaggtgtggccc
agcggcgacgcgagcctggcagcggcagcgtgggctcgagagatccgcgttgaccgcctt
tccccgcccagcgagcggtgccagccgctcgccgtgatgcataccgtggccgtcggtgct
cgctgcctcgtcatggagtccaggctgcccaaggcagcggatgagccaccccagcctctc
gtcgccatgcacgctgcttgcctcaaggaaaacaagactgcagttgttccactaggagag
gaagaattgcatttagtggcaatgacatccaggagaaacctgacaaatcacgcatgtttc
tggggatataaagtgccatttggtttgtacaattcttgcttgactatgttaaatctccgg
tgccttgggatcgtatttgaccttgatgagacactgattgtcgccaatactacacggtct
tttgaggacagaattgacgcgcttcagagaaagttgagcaatgagactgatccacagcgc
ataaacggtatgatagcggagattaagaggtaccaagatgataagtctatcctaaagcag
tacattgaaggtgatcaggtctatgatgatggaaaaatgtataaagtgcaacctgagttg
gttccgccattatccgataaccatcaaccaatgacacgtccagttatacgattacaagag
aagaatattatcttgacgagaataaatcctttgataagggataccagtgttcttgtacgt
ttaaggccagcatgggaggatctccggagctacttgattgctagaggtcgcaaacgtttt
gaggtctatgtgtgtacaatggctgagagagactacgccttagaaatgtggaggttgctt
gatccagactcaagattgattaactctgttcaacttaatgacagaatggtgtgtgtaaaa
tctggtttaagaaagtccttgctgaatgttttccatgatggatcctgccatcctggaatg
gccctagtaattgatgaccgactcaaagtctgggatgagaaggatcaatctagagttcat
gtggttcctgcattcactccatattatgcaccacaagcagaggcaaactgttctatccca
gttctctgtgtcgccaggaatgttgcatgcaatgttagagggggcttctttaaggacttt
gatgaaggcctcttaccaagaattagcaatgttttttatgaggatgaaatcaatgaaatc
ccatctgctccagatgttggcaattatttgatttcagaggatgagaatgttgcggcagtg
aatggaaacagggatccattggcttttgatggtatggctgatgctgaggttgaaaggaga
atgaaggaagcatctggaaatgctcaagcttttactacaacagcagctaactttgtgatg
ccagtactccctggtcaaaatttcgtttcatcttcagtagcaccagtagccccatccctt
ggcatggtgcctttgagtaataatcagggtccacctccattcactcaaccagttgctcaa
ctgagtctctcagatccactgcaaggctctccagctagggaagagggtgaagttcctgag
tcagagttagatcctgacacaaggagaagacttcttatattacaacatggtcaagacacc
agagatcctacacctcctcttccagcagtacctcctgttcaagtcccagttcctccagtt
caacctcatggaaattggtttcctgtagaggatggcatgaatccaaataatctaaacagg
ggttctgcagggttccctttggaatctgaaactatgcactatgataaaaagcaactacct
cacccattctttcatggtggggaaaaccctatatcctctgatagatttagttatcagaac
cagaggtatccctcccagctaccgcatagtgaagatcatcgcgttcttcagaaccatgca
ccgtcaagatacagatccttccctggagaggagctagcaactcggcatgtttcttcaagt
cagagaaacaaccagatagtaccaggacaacactttgctcggcatgcagggagctctgct
ggcatactagaggagattgctatgaagtgtggttctaaggtggagtacaggtcagcacta
tgtgatactgcggatttacagttctcaatcgaggtttggattgttggagaaaaagtaggc
gaaggcattggcaggacaaggaaagaagcacagtgtcaagctgcagaaatctcattaaga
aatttagctaataaatatctgtcatctgatccaaataagatgactgatatgaaagaaaat
ggttttggtagcaatacaaacatttttggataccctggaaatagtagggacgatgtgtta
ccaattgcaagtacttcagaagaaactcgctttgtgaagatgggggagaacaattccaga
aaagcaggaggttctattgctgctctcaaggaactttgcacagctgagggatataactta
gtttttcaagctcggacatctcctgatagttcagtaggcaaagaagcttatgctgaggta
gaagtttgtgggcaaattctaggcaacggagtgggaataacatgggaagatgctaagctt
caggctgctgatgaagctcttggaatgttgagatccatgcttggtccacttgctcagaaa
cggtccagttctccaaggtcactggcacccagttttgataagcgcttcaagccagatttt
ccacgggcagtgcaaagggttccttatggtagatattcccgaattgaaggccatgttcct
tga
DBGET
integrated database retrieval system
