Oryza sativa japonica (Japanese rice) (RefSeq): 4336079
Help
Entry
4336079 CDS
T01015
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR
PPR_2
PPR_1
PPR_3
PPR_long
E_motif
Motif
Other DBs
NCBI-GeneID:
4336079
NCBI-ProteinID:
XP_015636480
UniProt:
A0A0P0WBM1
Q7XMZ6
LinkDB
All DBs
Position
4:complement(23149873..23151760)
Genome browser
AA seq
767 aa
AA seq
DB search
MPPTPPLAALHRFLASPSPPPLPSLLTLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALA
ALAFAASPCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAEL
GALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWT
AVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGF
GVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKA
VELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISM
YAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDT
NSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGM
VKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHG
ELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMH
GEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHY
ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDP
ENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaactcctccgctcgccgccctccaccgcttcctcgcctcgccgtccccgccg
ccgctcccctcgctgctcaccctccacgcgctcgccgtcacatccggcctctccccgcgc
cccgacttcgccgccaagctcgtctccgcctactcctccgccggcctccccgccctcgcc
gcgctcgccttcgccgcctccccctgcccggacgccttcctctggaactccctgctccgc
tcccgccaccgcgcctccgacttcgcctccacgctctccgcgcaccgccgcatgcgcgcc
tcgggggcgcggccctcccgcttcaccgcgcccctcgtcgcctccgccgccgcggagctc
ggcgccctccctgtaggcgccgccgtccacgcctactccgtcaggttcggcctcctggag
ggcgatggttcagtcgcggtcgcgtcgtcgctggtctacatgtacgccaggtgcggcagc
gtccgcgacgccgtgaggctgttcgacgaaatgcccgagagggacgtggtcgcgtggact
gccgtgatctccgggtgcgtgtgtaacgggcagtgcggggaagggctgagctacttggtg
cgaatggttcggtctgcaggtgatggcggtgcgaggccgaactcacggacgatggagagt
gggttggaggcctgcggggtgctaggggagctctctgttgggacatgcttgcatgggttt
ggggtgaaggccggggttggacactgcccgtcggtggtttcatcgcttttttctatgtac
actaagtgcgatagcactgaggatgcacggattttgttcccggagttgccggagaaagat
ttggtttcctggaccagcttgattggagcatactgtagggcaggccatgctgagaaggct
gtggagttgttcctgggcatggaggagtctggtctgcaaccagacgaggttgttattagt
tgtttacttgcagggttgggtaatgatgctaaggtgcgtggagggaagacgtttcatgca
gctatagtgaggagaaactttggagatagtgttctgattgggaatgctttgatctcgatg
tatgcaaagtgcaaacaggttgatattgcagccacggttttcagaatgttgcatcaacga
gacacagactcatggagttcaatggttgtagcatattgcaaagctggacttgatttgaaa
tgcttggagttgtatcgagaaatgcagttcagagacaaggatgagtttgaatatgacacc
aacagtttgatttccattatttcttcttgttcaaggcttggtagactacgattaggtcaa
tcagcacattgctattcaatcaaacacttagccggtgaaaattcatcagttgcaaatgca
ctaattagcatgtatggaaggtgtggtaattttgacgttgcacggaaaatatttggtatg
gtcaaaacaaaggatgttgtcacatggagtgcattaatttccagctattctcacctgggg
cattcaaaggatgctttgttactgtatgatcagatgctcactgaaggtgttaaacccaac
tcagcaaccttggtctctgtcatttcatcttgtgcaaatttggctgcattggaacatgga
gagctcatacattctcatgtgaaagatgtggggctggagtgtgatttgtcaatttgcaca
gcacttgttgacatgtatatgaaatgcggacaacttggcatcgcaagaaaaatgtttgat
tccatgctcgaaagggatgttgttacttggaatgtgatgatatcaggctatgggatgcat
ggtgaagcaatacaagcattaaaactttttagtatgatggaaagaggaaatgttaagcct
aatagcctcacttttcttgccattctgtctgcttgctgccatgcaggacttgttgacaag
ggcagggagttgttcactagaatggaggaatactcccttgagcctaacctgaagcactat
gcctgtatggtggatcttctagggaaatctgggcatcttcaagaagcagaagatgtggtt
tctgcaatgccaatagaacctgatggtggaatatggggaactttacttggtgcctgcaaa
atgcatgacaattttgaaatgggtttacgggttgcaaagaaggcgtttgcttctgaccca
gaaaatgatgggtactacattttaatgtcaaattcgtatggtagtgctgagaaatggaat
gaaatagagaaactaagagacatgatgaagaatcatggagtggaaaagagtataggttgg
agcacaattgatatttgtgggtaa
DBGET
integrated database retrieval system
