Oryza sativa japonica (Japanese rice) (RefSeq): 4338096
Help
Entry
4338096 CDS
T01015
Name
(RefSeq) TPR repeat-containing thioredoxin TTL1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_17
TPR_19
TPR_14
Thioredoxin
TPR_16
TPR_8
TPR_12
TPR_9
Coatomer_E
ANAPC3
TPR_7
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
4338096
NCBI-ProteinID:
XP_015637442
LinkDB
All DBs
Position
5:6858443..6862596
Genome browser
AA seq
652 aa
AA seq
DB search
MSHRAPMPGGSSSLSDALAAAALRDKPDSLPPGRLSPVSPLVHSRLPTPTSSSGSSGSAP
PRPARRGGGDYHGVGEGFGPLIYTSCSSSAGGGGGGVGASTATSALAAGAFPAGNICPSG
RLPTTPPVPPPRAARRDVLGSGTGNYGHGSVVRARCAAPVSSSEDHASAVRMSAAASAEA
EEVRRAGNEQYKNGCFEEALRLYDRALALCPDSAACRANRAAALIGLTRLGEAVEECEEA
IRLDPSYGRAHQRLASLQIRLGRTADARKQIGMGGLQPDIVELHKLEAVDKHLGRFADAR
KIGNWKSALRECNAAIAAGADSCAMLFASRAEALLQINQLDEADLAISRASKLDCSSSCS
QDMMFCGFQSNSYLYYVHAQVDIAFGRFDSAMSSMEKARKIDSGNVEVMAMHKSVRTVAQ
ARTLGNELFHSGKFAEAFLAYGEGLKHHPANSVLYCNRAACMFKLGQWEKSIEDCNEALK
IQPNYWKALLRRAASYGKIEQWADSVKDYEVLRRELPGDTEVAEGHFHALVALRSSRGED
VSNMKFGGEVEALVGAEQFQMATTLPGVSVVHFMAPLNQQCSDIAPFVDALCTRYPSVNF
LKVDITENPTVTQLENVKTVPTFKIYKDGTRVMEMICPSHQLLESSLRQYEV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccgggcgccaatgccggggggctcctcctccctctccgacgccctcgccgcc
gccgcgctccgcgacaagcccgactcgctcccgccgggccgcctctcccccgtctccccc
ctcgtccactccaggctccccactcccacctcctcctccggctcctccggctccgctccg
ccgaggcccgcgcggcgtggtggtggtgactaccacggcgtcggcgaggggttcggcccg
ctcatctacacgtcgtgctcgtcgagcgcgggtggtggtggcggcggcgtcggcgcgagc
acggccacctcggcgctcgccgccggcgcgttccccgcggggaacatctgcccctccggc
cgcctccccaccacgccgccggttccgcctccccgtgccgcccgccgcgacgtgcttggc
tccggcaccggcaactacggccacggaagcgtcgtccgcgcgcgatgtgccgctccagtc
tcctcctccgaggaccacgcgtcggcggtcaggatgtccgcggcggcgagcgccgaggcg
gaggaggttaggcgcgccgggaacgagcagtacaagaacgggtgcttcgaggaggcgctg
cggctgtacgaccgcgcgctcgcgctgtgccccgacagcgccgcgtgccgtgccaaccgc
gccgcggcgctcatcgggctcacccgcctcggcgaggccgtcgaggagtgcgaggaggcc
atccggctcgatccgtcctacggccgcgcgcaccagcgcctcgcgtcgctgcaaataagg
cttgggcgcactgctgatgctcggaagcaaattggcatgggtggcctgcagccggacatt
gtagagttgcacaaattagaagcagtggataaacacttggggagattcgctgatgcgcgc
aagattggcaactggaaaagcgcgctgagggaatgcaacgctgcaatcgcggcaggagca
gactcttgtgcaatgctctttgcttctagagcggaagctcttctccagatcaatcaactt
gatgaggctgatttggcaatctctagagcatccaagcttgattgttcatcctcatgctcc
caggacatgatgttctgtggatttcagtccaactcatatctctactatgtacatgcccaa
gttgacatagcttttggaaggtttgatagtgcgatgtcatcaatggagaaagctaggaaa
atagattctggaaacgttgaagtgatggccatgcataagagtgtgagaactgttgcccaa
gcacgaaccttagggaatgaactttttcattctggaaaatttgcagaagctttcctagca
tacggcgaagggctcaagcatcaccctgcaaattcagtcctctactgcaatagggctgct
tgcatgttcaagttagggcaatgggagaagtctattgaggactgcaatgaagcccttaag
attcaacccaactattggaaggctctcctaaggcgtgcagcttcctatggcaagattgaa
caatgggcagattccgtgaaagattatgaggttcttaggagggaacttcctggtgacact
gaggtagcagaggggcatttccatgcccttgttgctcttaggtcatcacgaggtgaggat
gtatccaatatgaagtttggaggagaggttgaagcacttgtaggagcagaacaattccag
atggctacaaccttgccaggtgtttctgttgttcatttcatggcacctttaaatcagcaa
tgctctgatatcgccccatttgtggatgcactgtgtaccagatatccatctgttaatttc
ctcaaggtggatataactgagaaccccacagtgacacaattagaaaatgtcaagacagtt
ccaaccttcaaaatttacaaggatgggacacgagtgatggagatgatctgccccagccat
cagctgctggagtcctcactgagacaatacgaggtctag
DBGET
integrated database retrieval system
