Oryza sativa japonica (Japanese rice) (RefSeq): 4340018
Help
Entry
4340018 CDS
T01015
Name
(RefSeq) granule-bound starch synthase 1, chloroplastic/amyloplastic isoform X2
KO
K13679
granule-bound starch synthase [EC:
2.4.1.242
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00500
Starch and sucrose metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
4340018
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
4340018
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.242 NDP-glucose---starch glucosyltransferase
4340018
Glycosyltransferases [BR:
osa01003
]
Polysaccharide
Storage polysaccharide
4340018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
4340018
NCBI-ProteinID:
XP_015644490
UniProt:
Q0DEV5
B7EHV0
A0A8J8YHT8
Structure
PDB
LinkDB
All DBs
Position
6:1765524..1770644
Genome browser
AA seq
609 aa
AA seq
DB search
MSALTTSQLATSATGFGIADRSAPSSLLRHGFQGLKPRSPAGGDATSLSVTTSARATPKQ
QRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVM
VISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGE
KIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPL
ASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPV
EGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEW
DPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAA
AIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAV
PSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKV
AATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAP
LAKENVAAP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctctcaccacgtcccagctcgccacctcggccaccggcttcggcatcgccgac
aggtcggcgccgtcgtcgctgctccgccacgggttccagggcctcaagccccgcagcccc
gccggcggcgacgcgacgtcgctcagcgtgacgaccagcgcgcgcgcgacgcccaagcag
cagcggtcggtgcagcgtggcagccggaggttcccctccgtcgtcgtgtacgccaccggc
gccggcatgaacgtcgtgttcgtcggcgccgagatggccccctggagcaagaccggcggc
ctcggtgacgtcctcggtggcctcccccctgccatggctgcgaatggccacagggtcatg
gtgatctctcctcggtacgaccagtacaaggacgcttgggataccagcgttgtggctgag
atcaaggttgcagacaggtacgagagggtgaggtttttccattgctacaagcgtggagtc
gaccgtgtgttcatcgaccatccgtcattcctggagaaggtttggggaaagaccggtgag
aagatctacggacctgacactggagttgattacaaagacaaccagatgcgtttcagcctt
ctttgccaggcagcactcgaggctcctaggatcctaaacctcaacaacaacccatacttc
aaaggaacttatggtgaggatgttgtgttcgtctgcaacgactggcacactggcccactg
gcgagctacctgaagaacaactaccagcccaatggcatctacaggaatgcaaaggttgct
ttctgcatccacaacatctcctaccagggccgtttcgctttcgaggattaccctgagctg
aacctctccgagaggttcaggtcatccttcgatttcatcgacgggtatgacacgccggtg
gagggcaggaagatcaactggatgaaggccggaatcctggaagccgacagggtgctcacc
gtgagcccgtactacgccgaggagctcatctccggcatcgccaggggatgcgagctcgac
aacatcatgcggctcaccggcatcaccggcatcgtcaacggcatggacgtcagcgagtgg
gatcctagcaaggacaagtacatcaccgccaagtacgacgcaaccacggcaatcgaggcg
aaggcgctgaacaaggaggcgttgcaggcggaggcgggtcttccggtcgacaggaaaatc
ccactgatcgcgttcatcggcaggctggaggaacagaagggccctgacgtcatggccgcc
gccatcccggagctcatgcaggaggacgtccagatcgttcttctgggtactggaaagaag
aagttcgagaagctgctcaagagcatggaggagaagtatccgggcaaggtgagggccgtg
gtgaagttcaacgcgccgcttgctcatctcatcatggccggagccgacgtgctcgccgtc
cccagccgcttcgagccctgtggactcatccagctgcaggggatgagatacggaacgccc
tgtgcttgcgcgtccaccggtgggctcgtggacacggtcatcgaaggcaagactggtttc
cacatgggccgtctcagcgtcgactgcaaggtggtggagccaagcgacgtgaagaaggtg
gcggccaccctgaagcgcgccatcaaggtcgtcggcacgccggcgtacgaggagatggtc
aggaactgcatgaaccaggacctctcctggaaggggcctgcgaagaactgggagaatgtg
ctcctgggcctgggcgtcgccggcagcgcgccggggatcgaaggcgacgagatcgcgccg
ctcgccaaggagaacgtggctgctccttga
DBGET
integrated database retrieval system
