Oryza sativa japonica (Japanese rice) (RefSeq): 4342469
Help
Entry
4342469 CDS
T01015
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
4342469
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4342469
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4342469
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4342469
Peptidases and inhibitors [BR:
osa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
4342469
Ubiquitin system [BR:
osa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4342469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
ubiquitin
Malt_amylase_C
SASP
Motif
Other DBs
NCBI-GeneID:
4342469
NCBI-ProteinID:
XP_015647293
LinkDB
All DBs
Position
7:3412871..3424507
Genome browser
AA seq
1119 aa
AA seq
DB search
MTTSPPPPPPAEQQQQQEEEEVLVPRQELPNGTQPMEVVPSEPAATVENQQIEDPPISRF
TWTIENLSRVSTKKLYSEIFVVGGYKWRILIFPRGNNVEYLSMYLDVADSAVLPYGWTRY
AQFSLSVVNQMHNKFTIRKETQHQFSARESDWGFTSFMPLGDLYNPSRGYLVNDTCIVEA
EVAVCKVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDM
PSGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDMHDSFMQHDVQELNRVLSEKLEDKM
KGTVVEGTIQQLFEGHHMNYIECINVDMKSTRKESFYDLQLDVKGCQDVYASFDKYVEVE
RLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPIQL
DLDRDDGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVT
KEDAKRALEEQYGGEEELPQTNPGLNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKD
IAEHLRIRLEKDREEKERRKKEKAEAHLYTIIKVARDDDLTTQIGKDIYFDLVDHDKVPS
FRIQKQMPFTQFKEEVAKEFGIPTQFQRFWLWAKRQNHTYRPNRPLTPQEETHTVGQLKE
AANKAHNAELKLFLEVELGLDLKPLPLPDKTREDILLFFKLYDPEKEQLRYVGRLFVKAS
GKPQDILPKLRKMAGFSQDEEIELYEEIKFEPNVMCEYIDNRLLFRACQLEDGDIVCFQK
SPKPDTADQYRYPDVPSFLVYIRNRQVVHFRSLEKPKEDDFCLEMSKAFTYDEVVEKVAQ
KLGVDDPTKIRLTSHNCYSQQPKPQPIKYRGVERLLDMLIHYNQTSDILYYEVLDIPLPE
LQALKTLKVTYHHGTKDEVSVHSIRLPKNSTVGDVLNDIKSKVELSHPNAELRLLEVFYH
KIYKIFAPNEKIENINDQYWTLRAEEVPEEEKNLGPFDRLIHVYHFTKDTQNQTQVQNFG
EPFFMVIREDETLSSIKERIQKKLKVPDEDFSKWKFAYISLGRPDYFEDSDTVASRFQRN
MYGAWEQYLGLEHPDTAPRKTHNANQNRHSFERPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctcccccgccaccgccgcccgccgagcagcagcagcaacaggaggaagag
gaggtgctcgtgccgcgccaggagttgcccaacggaacgcagccaatggaagttgtgcct
tctgagccagccgccactgtggaaaaccagcagattgaagatccaccaatctctagattt
acttggaccattgagaacctatcaagagtgagcacaaagaaactctactctgaaattttt
gttgttgggggctacaagtggcggattttgattttcccaaggggaaataatgttgaatat
ctgtctatgtatttggatgtggctgattcagcagtcctgccttatgggtggactagatat
gcgcagttcagcctctctgtggtcaatcaaatgcacaacaagtttacaataagaaaagaa
acacaacatcaattctctgctcgagaaagtgattggggttttacttcctttatgcctttg
ggtgatctctacaaccccagtagaggctatcttgtaaatgatacttgtatagtggaggcc
gaagttgctgtatgtaaggtggttgattattggagctatgactctaaaaaggaaactggt
tatgttggtctgaaaaatcaaggtgctacttgctatatgaattctcttcttcagactctg
taccatattccatatttcagaaaggctgtttatcatatgcccacaactgagaatgacatg
ccttcgggaagcattccattagctctgcaaagtctcttttataagctgcagtataatgac
agcagtgtctctacaaaggaactcacaaaatcttttgggtgggacatgcacgattcattc
atgcaacatgatgtgcaagaactaaatagagttctttctgagaagttggaagataagatg
aagggaactgttgtggagggcacaatacaacaattatttgaagggcatcacatgaattat
atcgagtgtatcaatgtggatatgaaatcaactagaaaggaatccttctatgatcttcag
cttgatgtcaaaggttgtcaggatgtctatgcttcttttgataagtatgtagaggtggag
cgcctggaaggagataacaagtatcacgcagaacaatatggactgcaggatgcaaagaaa
ggtgttcttttcatcgacttccctcctgttttgcaacttcagctaaaacgctttgaatat
gatttcatgcgtgatacaatggtaaagataaatgaccgctatgagttcccgattcagttg
gatcttgatagagatgatggaaagtacctctctccagatgcagataggaatgtgcggaat
ctttacactcttcacagtgttctcgtccatagtgggggtgttcatggtgggcattactat
gctttcatacggcctactctttctgatcagtggtttaagtttgatgatgagcgtgtaaca
aaagaggatgcaaagagggcattggaagagcaatatggtggtgaggaggagctacctcag
actaatcctggtctaaacaatactcctttcaagttcactaaatattcaaacgcatacatg
cttgtgtacattcgcgaaagtgacaaggacaaaataatttgtaacgtggatgagaaggac
atagcagagcaccttcgaattagattagaaaaggatcgtgaggaaaaggagcgtcgaaag
aaggagaaagctgaggcccacctatatactatcattaaggttgcaagggatgatgacttg
accactcaaatagggaaggacatatattttgatcttgttgatcatgataaggtcccaagt
ttccgcatccagaagcagatgcctttcactcaattcaaggaggaggttgcaaaagagttt
ggtattcctacccaatttcaaagattttggctgtgggccaagcgacaaaaccatacatac
cggcctaaccgtccactgactcctcaagaagagacgcacacagttggacagctaaaagaa
gcagcaaataaggctcataacgcagaactaaaattgttcttggaggttgaacttggactg
gaccttaaacctcttcctctgcctgacaagaccagagaagatatattgcttttcttcaaa
ctctatgatcctgaaaaggaacaactgcggtatgttggtaggctctttgttaaggcttcg
ggaaaacctcaggacattctgccaaaactgaggaaaatggctggtttttcacaggatgag
gaaattgaactttatgaggaaatcaagtttgagcccaatgtaatgtgtgaatatattgac
aataggcttctatttcgagcttgccagcttgaagatggtgacatcgtttgttttcaaaaa
tctccaaagccagatactgctgaccaatatagataccctgatgtcccatcctttctggtg
tatatacggaaccggcaggtagtccattttcgttcattggagaagcccaaagaggatgat
ttttgtttagagatgtcgaaggctttcacgtatgatgaagtagtggaaaaggtggctcaa
aaacttggtgttgatgacccaactaaaattcggcttacatcgcataactgttattctcaa
caacctaaacctcaacctattaaatacagaggtgttgagcgtttgctggacatgctgatt
cactataaccagacttctgatattctttactatgaagtattggatataccactcccagaa
ttacaagctctgaagacattaaaagttacatatcatcatggcacaaaagatgaggtgtca
gttcacagtattaggttgccaaagaacagcactgtcggtgatgtgctaaatgatataaaa
tcaaaggttgagctgtctcatcctaatgctgagcttagactacttgaggttttctatcac
aagatatacaagatttttgcaccgaatgaaaagatagaaaacatcaatgatcagtactgg
accctgcgtgcagaggaggttccggaggaagagaaaaatcttggtccttttgatcgcttg
attcatgtataccattttaccaaagacactcaaaatcagacgcaagttcagaactttgga
gaacctttctttatggttattcgtgaggatgaaaccctttcttctattaaagaacggata
cagaaaaaactaaaagttccagatgaggatttctcaaagtggaaatttgcctacatatca
cttggtcgcccagattattttgaggattcagacactgtagcttcaagatttcagcgaaac
atgtatggagcttgggagcaatatcttggactggagcatccagacacggctcctagaaag
acacacaacgctaatcagaaccgccattcatttgagagacctgtaaagatctataactag
DBGET
integrated database retrieval system
