Oryza sativa japonica (Japanese rice) (RefSeq): 4343046
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Entry
4343046 CDS
T01015
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
osa03012
]
4343046
Translation factors [BR:
osa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
4343046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
Motif
Other DBs
NCBI-GeneID:
4343046
NCBI-ProteinID:
XP_015646988
UniProt:
Q7EY18
LinkDB
All DBs
Position
7:13587575..13604628
Genome browser
AA seq
1933 aa
AA seq
DB search
MAPKSKRGKAKGEKKKKDEKVLPVAIDITVNLPDQSHVILKGISTDRIIDVRRLLCVNTA
TCAITNYSLSHELRDGRLKDGADIATLKPFTLTLVEEEYDEESAVAHVRRLLDIVACTAS
FGPPPPPPPPPSPKDAAADPAKEPSGSKAGSAAATGGRRTGSPPPSPAPVAKDAATKDDA
AAAAAAAAAKESSASAELEAEMSGACPRLGAFYEFFSLANLTPPLHFIRRVAQPRQEEQP
SDDHLFFLEAKLCNGKFVVVEARRKGFFSLGKQRVLCHNLVDLLRHLSRAFDNAYEDLMK
AFLERNKFGNFPYGFRANTWLVPPIAAQSPSTFPPLPSEDETWGGNGGGWGRDGKSDMLP
WADEFLYLTSMPCKTAEEREIRDRRAFLLHSLFVDVAIFRAIAAVRHVMEIKDVSASANI
DEVLHSETVGNFSITVTRDSSDASCKLDTKIDGSRATGMDFKHLAERNLLKGITADENTA
AHDVESLGIVNLRYCGYVAVAKVNNIEKAKVNTSIKPIDITDQPEGGAHALNINSLRMLL
NDANSTGEKKTLNLPQNNKQEELIAAHSFVENLLKESLQKLEEEESEKQSFMRWELGACW
VQHLQDQKNSDKDKKQGGEKEKKKVVDKSAKETKIEGLGKPLKALKHSKNNVDVADKGSS
LGEKSMCDGTSSAESQKFKPSAVQLPQGESNASENESLLKDLLSDSAFTRLKDSETGLHQ
KSPPELIEMALKYYDEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGQVVKLS
EKLSHVQSLCVHEMIVRAFKHIVRSAIAATSDMRQLALAIAAALNLLLGVPEPEVFTSSD
GVRPLVWKWLVAFLKKRYEFELTEQHYHDVRKYALLRGLCHKVGIELAPRDFVMDSAFPF
QKQDIISLVPVHKQVACSSADGRQLLESSKTALDKGKLEDAVNYGTKALAKLITVCGPYH
RMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQ
HTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQR
LLGPDHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEY
FESKVIEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNEESKGRDSESSKRRYSSIK
VLSNSNGGSNVASPEVSPRDSTSANADEDKQIIEPSQDDTVNFVAEAEIKQNLKSVEYSA
SSEQPVERAEVINVPREVVQEELVEPEDGWQPVQRPKSAAGSGKQMKHFNPTTRKMYDPD
NHDPQYTSQYKARNSYPNSRYYFLKKRTVVPATYTDPHQHMKVQTSSARFGRKIYKAVTY
RIKPGSTSTEAQDASAEQMSGKAESQMAYSQVHSTTSVDHKESEPHGTLVTSSGNAPSYK
DVALARPGTIAKAQIQKSRDDVVQNQPSLGQIIAQEMKDSLVDTHQVEQGSVSANINNPK
EVGNIPEEIQHSEDIKVSDRELDTGDIDTDGSPNDEKSLNGSNLANDHTSQEPVSCSNEN
AAVEFAESSNSAKDEQSRKSDMEIFEEALPTSIGPIAVSASTANTEGLAGAGNEKSKPNL
LLNSIDLREMPNKKLSAAAPPFNPSPPAILSPLAVSVGLPPPGAIPGVAPWPVNVPMHPG
HSTMVPSGPPLCTSPHHLYPPAPRSPNLLHPVPFIYPPYSQPQVIPSSTFPMNTNIFRPN
HYGWQPYMNAPSSEFVPGSAWPSNHPVDFTPTPHVVNPISQSLADTHIQSDAAVVSIGPS
LDSNTMAVKEEMEATMVGSGNLISNKRPADDQDKQLKDPVRIELNPDMPGDNAHGICATD
HLRSTVKNEDEGSFRIYVKGKSRRKQTLRIPISLLNKTYGSRSFKLVYNRVVRENDIFRP
STVSFAEVVSSGN
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagagcaagcgagggaaggccaagggtgagaagaagaagaaagatgagaaa
gttctccctgtggccattgacatcactgttaacctccctgaccagtctcatgtcattctc
aaggggatttcaactgacaggatcattgatgtgaggcggctgctatgcgtaaacaccgcg
acgtgcgccatcacaaactactccctctcgcatgagctccgtgatggtcgcttgaaggat
ggtgccgatattgcaacattgaagccatttacactcaccttggtagaagaggagtacgac
gaggagagcgcggtggcgcacgtacggcggctgcttgacatcgtcgcctgcaccgcctcc
ttcggtccgccgcccccgccgccgccgccgccgtcgccgaaggatgcggccgccgacccc
gccaaggagccctcgggctccaaggctggctccgccgcggccacgggcgggcgccgcacg
ggctccccaccgccgtcgcctgctccggtggcgaaggacgcggccaccaaggacgacgcc
gccgccgctgcggcggctgcggctgccaaggagtcctcggcctccgcggagctggaggcc
gagatgagcggcgcgtgcccccgcctcggcgccttctatgagttcttctccctcgccaac
ctcactccgcccctccactttataaggcgagtggcgcagcctcggcaggaggaacagcct
tcggatgatcatctcttctttcttgaggcaaagctttgcaacgggaaatttgttgttgtt
gaagcccggagaaagggattcttcagtttggggaagcagcgcgtcttgtgccataatcta
gtcgatctgttgaggcatcttagtagagcatttgacaatgcatatgaagatcttatgaag
gcatttttggaacgtaacaagtttggaaatttcccttatgggtttcgtgcaaacacatgg
ctcgttcccccaattgctgctcaatctccatcaacatttcctcccctcccttctgaggat
gaaacctggggtggcaatggaggtggttggggaagggatggcaagagtgacatgttgcca
tgggcagatgaattcttgtatctcacatccatgccttgcaaaactgctgaggaaagggaa
atccgtgacaggagagcattcctacttcacagcttatttgtagatgttgccatctttaga
gctattgcagctgtaaggcatgtaatggagattaaggatgtatcagcatcagccaatata
gatgaagttttgcattctgagacagtgggaaattttagcatcactgtcacaagagattct
tcagatgcaagctgcaagttggataccaagatagatggtagccgagccacaggaatggac
ttcaagcatcttgcggagagaaaccttttgaaaggaataactgctgatgaaaatacagct
gcccatgatgtggagagtttgggcattgtcaatcttagatactgtgggtatgttgcagtg
gcaaaggttaacaatattgagaaagccaaagtgaacacttctattaagccaattgatatt
acagatcaaccagaagggggtgcacatgcattgaacattaacagtttgaggatgctgctc
aatgatgccaattcaactggagagaaaaagacgttgaaccttccacaaaataataagcag
gaagaactaattgcagcacattcttttgtggagaacctgttaaaggagagtcttcagaag
ctcgaagaagaggaaagtgaaaaacagtcctttatgaggtgggaacttggtgcctgctgg
gttcagcatttacaggatcagaaaaattctgataaggacaaaaagcaaggtggtgagaag
gaaaagaaaaaggtggtagataaatctgcgaaggagacaaagattgaaggtcttgggaaa
cctctgaaagctcttaagcactcaaaaaataatgttgatgtcgctgacaagggatcctca
ttgggagaaaaaagcatgtgtgatggaacaagttctgcagaaagccaaaaattcaagcca
tcagctgttcaattgcctcagggagaatctaatgcctcagagaatgaaagcttgctgaag
gatttattatctgattctgcctttacaaggttgaaagattcagaaacaggactccaccag
aagtcaccgcctgagttgattgagatggctttgaagtactatgatgaagttgctcttcct
aagctggttgcagattttggttccctggaactttcacctgttgatggtaggaccttgaca
gatttcatgcataccagaggcctacagatgcgttcccttggacaagttgtcaagctttcg
gagaagctttcacatgtacagtccctctgtgtacatgagatgatagtgagggcattcaag
catatcgttcgctctgcaattgctgctacttcagacatgcgacaattagcacttgcaata
gctgcagcgctgaatttactgcttggtgttcctgagcctgaggtctttacaagttccgat
ggtgtgcgcccactagtatggaaatggctagtggccttcttgaaaaagagatatgaattt
gagctcactgagcaacattaccatgatgttaggaaatatgctctcctgagaggactatgc
cataaggttggcattgaactggcaccccgagattttgttatggattctgctttcccattt
caaaaacaagacattattagcttggtaccagtacacaagcaagttgcatgctcatctgct
gatggaaggcaactgctggaatcctctaaaactgcccttgacaagggaaaacttgaagat
gctgtcaattatgggaccaaggctcttgctaaactcataacagtttgtggtccctatcat
cgaatgacagctggagcttatagtctgctagctgttgtattgtatcacactggtgatttt
aatcaggctacgatctatcagcaaaaggccctagacatcaatgagagggaacttgggcta
gatcaccctgatacaatgaagagttatggagatcttgctgtgttctactaccgtttacaa
catacagaactggctctaaagtatgtcaagcgtgcactatatctactgcatcttacatgc
gggccatctcatccaaacacagctgcgacatatatcaacgtagctatgatggaggaaggc
ttgggtaatgtgcatgtagcacttagatacttgcacaaagccttaaaatgcaaccagaga
ttacttgggcctgaccatatccagactgctgcgagctaccatgccatagccattgctctc
tcattgatggaagcttattccttgagtgttcagcatgagcaaacaaccttgcaaattctt
cgtgcaaagcttgggccagatgacttgcggactcaggacgctgccgcttggcttgaatac
tttgaatcaaaagttatcgagcaacaggaagctgcacgcaatggaactcggaaacctgat
gcatcaattgctagtaaagggcatctaagtgtatctgatcttcttgattatataaatccc
aatgaagaaagcaaaggaagagattctgaatcaagtaaaaggaggtactcaagcataaag
gtcctgtcaaattcgaatggaggttccaatgtagcaagtcctgaggtatctccaagagac
tctacttctgcaaatgcagacgaggacaagcaaatcatagagccatcacaagatgatact
gttaactttgttgctgaagctgaaattaagcaaaaccttaaatccgtagagtactcagca
tcatctgagcaaccagtagagagagctgaggtgattaatgtaccaagggaggttgttcag
gaggaactagtagaacctgaagatggttggcagcctgttcaaagacctaaatcggctgca
ggttcagggaaacaaatgaagcatttcaatcccaccaccagaaagatgtatgaccctgat
aatcatgatccacaatatacatctcaatacaaggcacgaaattcctatccaaatagccgt
tactacttcttaaagaagcggactgttgtacctgcaacgtacacagaccctcatcagcac
atgaaagtccagacatccagtgcaaggtttggtcgtaagatatacaaggctgtgacatat
cggattaagccagggagtacatccacagaggcgcaagatgcttctgctgaacagatgagt
ggtaaagcagagtcccagatggcttactcacaagtacacagtactacttctgtagatcat
aaagaaagtgagccacatggaactttggtgacaagtagtggaaacgcgccatcatacaaa
gatgttgcattagcacgtccaggtaccattgcaaaagctcaaatacaaaaatcaagagat
gatgtagtccagaatcaaccgtcacttggtcaaattattgcacaagaaatgaaggattcc
ttggtagatacacatcaagtggaacaaggatctgtatctgcaaatatcaataatcccaaa
gaagtaggcaacattccagaagaaattcagcattcagaagacattaaagtgtctgataga
gaactggacactggggatattgacacagatggttcaccaaatgatgagaaatccttaaat
ggcagcaatcttgcaaatgatcacacaagtcaagaaccagtaagttgtagcaatgaaaat
gcagccgtcgagtttgcagagtcttctaattctgcaaaagatgaacagagtcggaaatcg
gatatggagattttcgaagaagctctgcccaccagcattggacctattgcagtttctgct
tctacagctaatactgagggccttgcaggtgctggaaatgagaaatcaaagcccaatttg
ctgctaaatagtattgatttgagagagatgcctaataagaagttgtctgctgctgcaccg
ccatttaatccctctccgccagctatccttagtcctcttgcggtaagtgtgggtctcccg
ccaccaggtgctatcccaggagtcgcaccttggcctgtgaatgtacctatgcaccctgga
cattcaactatggtaccaagtggtcctccattgtgcacctcccctcaccatttataccct
ccagctcctcggtcacctaatctcttgcatccagtgccatttatttatccaccatatagt
cagccgcaggtcattccaagctccacatttcccatgaacactaatatttttcgccctaat
cattatggatggcaaccctatatgaatgcaccttcatcagagtttgtgccaggatcagca
tggccaagcaaccatccagttgattttacgccaactccacatgttgttaaccctatatcc
cagtctttagcagacacccacattcagtcggacgcagctgttgttagtataggaccttca
ctggacagcaatactatggcagtgaaggaggaaatggaggctacaatggttggaagtggc
aatttgatcagcaacaaacgtcctgcagatgatcaggacaaacaattaaaagatccagtt
agaattgaactgaatcctgatatgccaggagacaacgcacatggtatatgtgcaacagac
catttgcgaagcaccgtgaagaatgaagatgaaggtagttttaggatatatgtcaaaggg
aaaagccggcggaaacaaactctcagaatcccaataagtttgcttaataagacatatgga
tcacgctctttcaagcttgtgtacaacagagtagtcagagaaaatgacatcttcaggcca
tcgactgtctcctttgctgaagttgtttcctctggcaactaa
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