Oryza sativa japonica (Japanese rice) (RefSeq): 4343740
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Entry
4343740 CDS
T01015
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4343740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4343740
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
4343740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
4343740
NCBI-ProteinID:
XP_015646811
UniProt:
Q0D539
Q84ZR9
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All DBs
Position
7:23704159..23708868
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AA seq
472 aa
AA seq
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MEADSGKLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVA
ERVTMDKHMIDGRMVEAKKAVPRDDQSITSKNNGSSIGSPGPGRTRKIFVGGLASNVTEV
EFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKR
AVPKEQSPGPAARSPAGGQNYAMSRVHSFLNGFNQGYNPNPIGGYGMRVDGRYGLLTGAR
NGFSSFGPGYGMGMNSESGMNANFGANSSFVNNSNGRQIGSFYNGSSNRLGSPIGYVGLN
DDSGSLLSSMSRNVWGNENLNYPNNPTNMSSFAPSGTGGQMGITSDGINWGGPTPGHGMG
NISSLGLANLGRGAGDSFGLPSGSYGRSNATGTIGEPFSAPPNAYEVNNADTYGSSSIYG
DSTWRFTSSEIDMPPFGNDLGNVDPDIKSNIPASYMGNYTVNNNQTSRGITS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggactccgggaagctcttcgtcggcggcatctcgtgggagacggacgaggac
cgcctccgcgagtacttcagccggttcggggaggtcaccgaggccgtcatcatgcgggac
cgcaacaccggccgcgcccgtgggttcggcttcgtggtcttcaccgacgcaggcgtcgcc
gagcgggtcaccatggataagcacatgatcgacgggcgcatggtggaagcgaagaaagct
gttcccagggacgaccagagcatcaccagcaagaacaatggcagcagcatagggtcacct
ggaccaggccgtactagaaagatctttgttggaggcttggcctctaatgttactgaggtt
gaatttagaaggtattttgagcaatttggtgtgattacggatgtggttgtcatgtacgac
cacaacacgcagaggcctaggggctttggattcatcacctatgactcagaagatgcggtg
gacaaggcactgcacaagaacttccatgagctgaatggtaagatggttgaggtcaagaga
gctgttccaaaggagcaatcacctggacctgctgcacgttcacctgcgggagggcagaac
tatgctatgagcagggtccatagcttcttgaatggtttcaaccagggttataacccaaac
cctattggaggttatggcatgagggttgatggaaggtatggtctgcttacaggcgcacgg
aatggattctcttcatttggccctggttatggaatgggcatgaattctgaatctgggatg
aatgcgaattttggcgccaattctagttttgtcaataactccaatgggcggcagataggt
tcattctacaatggtagttcaaacagattaggtagtcctattggttatgttggtcttaat
gatgattcaggatcactattgagttcaatgtcaaggaatgtttggggtaatgaaaatctg
aactacccaaacaaccccacaaacatgagttcttttgcaccatctggaactggaggtcaa
atgggtattaccagtgacggtattaattggggagggcctactcctggccatggaatgggc
aacatttcaagccttgggctggctaaccttggccgtggagctggagacagttttggcttg
ccttctggcagctatggaaggagcaatgcaactggtaccattggtgaacccttctctgca
ccacccaatgcatatgaagtgaacaatgcagatacatatggcagcagctccatttatgga
gactcaacttggaggttcacgtcatctgagattgatatgcctccttttggtaatgacctt
ggaaatgttgatccagatatcaaatcaaacataccagcaagttacatgggcaactatact
gttaataataatcagacaagcagaggtatcacttcctag
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