Oryza sativa japonica (Japanese rice) (RefSeq): 4344685
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Entry
4344685 CDS
T01015
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4344685
Enzymes [BR:
osa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4344685
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Topoisomerases
4344685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
PspA_IM30
DivIC
RodZ_C
Motif
Other DBs
NCBI-GeneID:
4344685
NCBI-ProteinID:
XP_015650112
UniProt:
B9FZ48
Q84ZL5
LinkDB
All DBs
Position
8:3136760..3142892
Genome browser
AA seq
916 aa
AA seq
DB search
MAVVDPVMFDNDDEEGPISFKRSSTSVKNRPTPTKQEGSSGNAGPIRSPKAVASNQQKNG
LTGVSRPLQQRPQSSSPNPRPLGSGQPNSSKEHSSHNSNSVDKSKLKRPFVEDKSDDSED
DHKPIGLRRKVEDRNLKKPAVGSGTANDSDDDKPLSLKINSTKTPSSSANKAIVLKTTPK
IEQPGDDSEDDKPLASRLPTNAALKRGGNVSDDSEDEKPLAARFSKVTGNASASISSSKD
KVLSASIKASSSSKMSNNDASTSRNSIKRPIDNNNQTSSALKKARPSDVSASASVKREPK
ADDNDNVPLSQRLKMGESSKSKPPAKNIVKKSPSSLKKDNKKMKMKMKTKKTMKNSQFSK
TMKVPPGSGGGQKWTTLVHSGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKD
TDYASKQTFIDNFFTDWRKILGKNHVIKKFELCDFTPIYEWHLREKEKKKQMTSEEKKAL
KEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIKPSDITINIG
KGAPIPECPIPGESWKEVKHDNTVTWLAFWNDPISQKDFKYVFLAASSALKGQSDKEKYE
KSRKLKHHVHKIRDTYTKDFRSKDKTKKQIAVATYLIDKLALRAGNEKDEDEAETVGCCT
LKVDNVTCVPPNKLQFDFLGKDSIRYFNTVEVELLVYKAIEEFRAGKKPGQDLFDKLDTT
RLNAHLKDLMPGLTAKVFRTYNASITLDDILHKETEDGTLLEKIAVYQRANKEVAIICNH
QRSVSKSHDSQMTRLNEKIDELKAQRDELKADLSKVRKGKNLGNDKDGKPKRNLAPEAFE
KKISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL
IAKFSWAMDVDPDFRF
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtcgatcctgttatgtttgacaacgacgacgaggaaggtccgatctccttc
aagaggtcgagcacctctgtgaagaacaggcccacccccacaaagcaggagggctcatca
gggaatgccggacctattaggagccctaaggctgttgcttccaatcaacagaagaatggg
ctgactggtgtttcgaggcctttgcaacagaggccgcagtcaagcagtccaaaccctcga
cctttgggatcaggtcagccgaacagttccaaagaacatagtagccataatagtaactca
gtggataagagtaaattgaaaagacctttcgtggaagataagtcggatgactcagaagat
gaccataagccaatcggattaaggagaaaggtcgaggatagaaatttgaagaaacctgct
gtaggaagtgggacagcaaatgattcagatgatgataaaccattgagtctcaagataaac
tcaacaaaaacgccttcgagtagtgcaaataaggctattgtactgaaaactacacctaaa
attgagcaacctggtgatgattcagaggacgataaaccactggccagcaggttgccaact
aatgctgctctgaaaaggggaggtaatgtttctgatgattcagaggatgagaagccattg
gctgcccgattttcgaaagttactggcaatgcatctgcaagtatctcaagttcaaaggac
aaggtcctgtctgcaagtataaaagcaagttcttccagcaagatgtctaacaatgacgcg
agcacatcacgaaattcaattaaaaggccaattgacaataataatcaaacaagttcagct
ctcaagaaggcgaggccttcagatgtttctgcgtctgcaagtgtcaaaagagaacccaag
gcggatgacaatgacaatgtacctctttcacaaagactgaaaatgggtgagtcttcaaaa
agcaagccacctgcaaagaatatcgtaaagaagagtccttcatctttaaagaaggacaac
aagaaaatgaaaatgaaaatgaaaacaaagaaaacaatgaaaaattctcagttctcaaag
acaatgaaggtccctcctggatctggtggtggacagaaatggactaccttggtgcacagt
ggtgttattttcccccctccatacaagcctcatggtgtcaagatgctttacaacgggcaa
cctgttgatctgacgccagaacaagaagaggttgccaccatgtttgctgtgatgaaagac
actgattatgcatccaagcaaacattcattgacaacttcttcactgattggagaaaaatt
cttggtaaaaaccatgtcatcaagaaatttgagctttgtgatttcaccccgatctatgaa
tggcacctaagagagaaggagaagaagaagcagatgacatctgaggagaagaaagcattg
aaggaagagaaattgaaacaagaggagaagtacatgtgggctattgtagatggtgttaaa
gagaaggttggcaatttcagagtagaaccacctggcttgttcagggggcgcggagagcat
ccgaagatgggaaaactgaagcgccgcattaaaccaagcgatattacaataaatatcgga
aaaggggctccgatccccgaatgtcccatacctggagaaagttggaaagaagtcaaacac
gacaacacagttacatggttggccttttggaatgatccaataagccaaaaagatttcaag
tatgttttcttggcagcaagcagtgcattaaagggccaaagtgacaaagagaagtatgag
aagtctcgaaaattgaagcatcacgtacacaaaattcgtgacacttacacaaaggatttc
agaagcaaagataagacaaagaaacaaattgcagtggcaacataccttatagataagtta
gcccttagggcaggcaatgagaaggatgaagatgaggctgaaactgttggttgctgtaca
ctgaaggttgataatgttacttgtgttcctccaaataaactgcagttcgacttccttggt
aaagattctataagatacttcaatactgtagaggttgaactgcttgtatacaaggcaatt
gaggaattccgtgctggcaagaaaccaggacaagatctctttgacaaactcgatacaacc
aggctaaatgctcatctaaaggacttgatgcctgggcttaccgcaaaagtgttccgtaca
tataatgcttcaatcaccttggatgatattttgcacaaagaaacagaagatggaactctt
cttgaaaaaattgcggtttatcaacgagccaacaaagaggttgctataatctgtaaccat
cagcgtagtgtctcaaaatcacatgattcccagatgactagattgaatgagaagattgat
gaattgaaggcccaaagggatgaattgaaggcagacttgagcaaagtaaggaaaggaaag
aatctaggcaatgacaaagatgggaaaccaaaaagaaatttggcccctgaagcgtttgaa
aagaagatatctcagattgaaaccaagatagagaagatggagatggataagaagattaaa
gaggatttaaagacagtggcactaggaacttcaaagatcaattaccttgatcccagaatt
actgttgcatggtgcaaacgccatgaagtacccatcgagaagattttcaacaaatcactc
attgcgaaattttcgtgggcaatggacgtcgacccggatttcagattttaa
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