Oryza sativa japonica (Japanese rice) (RefSeq): 4347307
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Entry
4347307 CDS
T01015
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4347307
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4347307
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4347307
Peptidases and inhibitors [BR:
osa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
4347307
Ubiquitin system [BR:
osa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4347307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
4347307
NCBI-ProteinID:
XP_015651433
LinkDB
All DBs
Position
9:complement(17600299..17609106)
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AA seq
927 aa
AA seq
DB search
MASAALSLAVAVVAVAVAAVVAVARGALRRAAARREEVRRLARLAAVEAEVAEREAYCYA
RGRGGVAGAPLWTVPEVASPREDEEEEEEEEAAAVELEMPAARQAEAAAAAAAVKGVCVV
CRRPTTFRCKRCKGVKYCTFKCQISHWRQGHKDECHPPRVDARPDNITVVSSVKKGVGMY
NSFEQSVKSSVEPAVEVNKSVAAVPELSEANLVSDGVDNERKKMRGQKASITAKVSEDVL
DNNRIRSVDSSRLPTSGKACNIQDATVNENFSKTSAGSSSSRVERSTTSEPELNHSNKQA
SGTDNLKSSRGLPSVSTVGTISSIHGSEKEAAMPNNRSLVKNIPRQQAAAKVVRHYPSEM
TLFPYEHFVKLYNFDKVELRPFGLVNLGNSCYANAVLQCLAFTRPLTAYLTEGLHSRNCS
KKEWCFMCEFEKLILEGRRGKSHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQ
SASMKEAKKNGVYGLPEETTLVQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDI
NTLEEALHRFTSTEILDGDNRYNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGNFGK
INKAVRFTEYLNLSNYMSTADDISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHK
MDDSQVKPVSLEKVLSKCAYMLFYARCSPRAPNSVRKMILAQDSSCTKKAKQMVDPGPPS
LEGGSYLSRHQGGQSCRDHIVYDLTYTFGGSSYTVVESPSPSDSSSLFSNSDAGSTSTFS
SDSTDSTRNSTSMEEYDYIFGSSDQMYPVSTVVIPEEHELSYSRQRSSLNPSTSSQYVDQ
AAEVEMLHQHQHQAGRGGWDEGDVMPFFYSNQGKHHDSSRSSNISSSNRKLTEQRRTIGE
VDHGPGEGHGSVLLRRAARERIAQAIY
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggcgttgtcgctcgcggtggcggtggtggccgtggcggtcgccgcggtg
gtggcggtggcgcgtggggcgctgcggcgcgccgcggcgcggagggaggaggtgcggcgc
ctcgccaggctcgcggcggtggaggccgaggtcgcggagcgcgaggcgtactgctacgcg
cgggggaggggcggcgtggcgggtgcgccgctgtggacggtgcccgaggtggcttcgccg
cgggaggacgaagaggaggaggaggaggaggaggccgcggcggtggagttggaaatgccg
gcggcccgtcaggcggaggcagcggcggcggcggcggcggtgaaaggggtgtgcgtggtg
tgccgaaggccaaccacgtttagatgcaagcgctgcaaaggggtcaaatactgtaccttc
aagtgccagatatctcactggagacaaggccataaagatgaatgccatccaccaagagtt
gatgccaggcctgacaatataacagtagtttctagtgttaaaaagggtgttggaatgtac
aattcatttgaacaaagtgtgaaatccagcgtagaaccagcggttgaagtcaacaagtca
gttgctgctgtgcctgaattgtctgaggcaaaccttgtctccgatggtgtagataatgaa
agaaagaagatgagaggtcagaaggcatctattactgcaaaggtttctgaggatgtcctt
gacaacaataggattagatctgttgatagttctaggctcccaacttctggtaaagcttgc
aatattcaggatgctactgttaatgagaatttctctaagacttcagcaggcagctccagt
tctcgagttgaacggtctaccacgtcggaacctgaactgaaccattctaacaaacaggct
tctggcacagacaaccttaaaagttcgagaggtttgccatctgtgtcaactgttggcaca
atttcttctattcatggatcagagaaagaagctgctatgccaaataatcggtcattggta
aagaatattcccaggcaacaagcagctgcaaaagttgtgaggcattatccatcggaaatg
acactttttccgtatgaacattttgtcaagctctacaattttgacaaggtggagctgcgc
ccttttggtcttgtgaaccttgggaatagttgttacgcaaatgctgttcttcagtgcttg
gcatttacgcggccacttacagcataccttacggaaggacttcattcaagaaattgttcc
aaaaaggaatggtgcttcatgtgtgagtttgaaaaactcattctggagggtaggcgagga
aaatctcacttgtcacctactggaatactatctcatttgcgtgacattggaagtagcttt
ggccccggtagagaagaagatgctcatgaatttctcaggtatgcaattgatactatgcaa
tctgctagcatgaaggaagccaagaaaaacggtgtttatgggctgcctgaagaaacaaca
ctggtgcagttaatatttgggggctatctacgatcgaagataaaatgcacaatgtgtcaa
ggcagttcagaacaatgtgaacgcattttggatcttactgttgaaatagatggggatatc
aatacccttgaagaagcacttcatcggtttacatctacagaaattttagatggtgataat
agatacaattgcagcagatgcaagtcatatgaacgtgccaaaaagaagttgacaatatca
gaagcaccaaacatcctgactattgcgctgaaaagatatcagtctggtaattttggcaag
atcaacaaggctgtcaggttcacggagtacttgaatttgtctaactacatgagtacagca
gatgatatttcccccgtgtaccagctctatgctgtggttgtccatcatgatgttatgaat
gcagccttttctggccattatgtgtgttatgtcaaagacacacaagggaagtggcacaag
atggatgacagccaggtgaaacctgtttctctggaaaaagtcttgtcaaagtgtgcatac
atgctattttacgcaaggtgttcaccacgggcaccaaactctgtaaggaaaatgattctt
gctcaagactcatcgtgcacaaagaaagccaagcagatggtggatccaggaccaccatct
ttggaaggaggaagttacttaagcagacaccaaggtgggcagtcatgtagagatcatata
gtctatgacctcacctacacattcggtggctcatcttatacagtagtggagtccccgagt
ccaagtgacagctcctcgctgttcagcaactctgatgcagggtcaaccagcactttcagt
agtgatagcactgacagcacaaggaattcgaccagcatggaggagtatgattacatattt
ggaagctcggatcaaatgtaccctgtaagcacggtggttatacctgaggaacatgaactt
agctattcgcggcagaggtctagcttgaaccccagcacttcaagtcaatatgtggatcaa
gcagctgaggttgagatgctgcaccagcaccagcatcaggccggcagagggggctgggat
gagggtgatgtgatgccattcttctattccaaccaaggtaaacaccacgatagtagtaga
agtagcaacattagtagtagtaataggaagttaacagaacagcgtaggacgattggggag
gttgaccatggccctggagagggccatggcagcgttttacttagaagggcggctagggag
aggattgcccaagcaatttattga
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