Oryza sativa japonica (Japanese rice) (RefSeq): 4348849
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Entry
4348849 CDS
T01015
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4348849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4348849
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
4348849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
4348849
NCBI-ProteinID:
XP_015612896
UniProt:
A0A8J8Y1N5
Q337M1
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Position
10:17250735..17255665
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AA seq
394 aa
AA seq
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MLFQVGGQGARPTFFEMSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLM
AVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVF
LVVLPYFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGEVS
NMARIKKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQ
ELMESSSRVSRIRNRELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEW
WYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVF
CYSCIFKSVSQHKRCPITLMPATVEQIRRLFHDL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccaggtgggagggcagggggcgcggcccaccttcttcgagatgtcggccgcg
cagcagctgccggccagcctccgcgccgcgctctcctactcgctcggggtttttgcacta
agacggccgttgttacataaagttttagattacgaggatgaattctttgccttgttaatg
gctgtccttgagtcccatagtttgcgaacgacagatggttctttttcggagtcattgtat
ggtctcaggcggagacctgttaaggtttcagtaaagagaagtagttctggtgcagaatcc
aatgataaagcctatgattctgttctaaggaagcgccagaaagtcctttctgttgttttt
ttggttgttttgccatatttcaagtcaaagctgcagtccatatataacaaagaaagggag
gccaggttgcaggcaagcctttggggtcagggtgatgttagattcgatgaagctgacctt
gtttcagatcaaggggagacttctcaagcacaagtcgaggctacaactggagaagtatca
aatatggcacgtattaagaagaattttgcggcattaataggtgtttgctatccatggatt
catgcgaccaatgaaggtctctcatttgcttaccagttgctgtatttgttggatggtact
gcattttatagtccagcactgcatgctcttgggcttcatgtttgtcgtgctacaggacaa
gagctgatggaatcatcttctagggtatcaagaatcagaaatcgagaacttgagagactt
cgtggtcctccatggctgaagaccatgcaaagggtgttacttaactgtatgtacactagc
ctagattatgcacaaactggtttgattgctgcagttttctttttcaagatgatggaatgg
tggtatcaatctgctgaggaaagaatgtcagctccgactgtatatcccccaccccctcct
ccacctctgccaaaggttgctaaagatggacttcccttgccccctgacaggacattgtgc
cccttatgctgccagaagcgcaataacccttctgttctttctgcttctggttttgtattc
tgctacagttgcatttttaagtcagtctcccagcataaaaggtgccccatcacattgatg
cctgccacagtagaacaaatcagacgcctctttcatgatttgtag
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