Oryza sativa japonica (Japanese rice) (RefSeq): 4350404
Help
Entry
4350404 CDS
T01015
Name
(RefSeq) pentatricopeptide repeat-containing protein At3g49240
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
PPR_long
TPR_14
Ax_dynein_light
Sacchrp_dh_C
Motif
Other DBs
NCBI-GeneID:
4350404
NCBI-ProteinID:
XP_015615156
UniProt:
Q53NS3
Q2R5L6
LinkDB
All DBs
Position
11:14027550..14029874
Genome browser
AA seq
661 aa
AA seq
DB search
MALSKPLLSRLLPLPLPLRPHLRLLCLATATPTPAPTPADADQATPTDAAAERRRRKRRL
RVEPPSARGGPAPQRAPGAPRPASNPNAPKLPEPASALSGKRLDLHRRILALVREDDLDE
AALLTRHSIYSNCRPTVFTCNAVLAALLRQARYADLLSLHRFVTQASVAPTVATYNLLLQ
AYCDCRRPDTALEHFRLLLKDDSPVLPSPTTYRILARSLAENGKLEQAIELKDGMLERGL
VAPDPQVYALVMGGFVNAGDGDTVVSLYEELVEKLGGGQILDGMVYGNLMKGYFLKGMEK
EAMDCYAEVLGEGSKVRFGAVSYNMVLDALGRNGKLDDALQLFDRMCEEHDPPRRIAVNL
GSFNVMVDAYCRAERFQDAIEVFGKMGEKRCAPDALSYNNLIDWLGKNELVGEAEQLYKE
MGERGVNPDEYTYVLLIESYFKVDRVDDSVSYFNKMFVAGLRPNANAFNKVIGGLVKVDR
LDEAQGFFDKMPEKEVKPNIGSYELLLRAYIDAARLDDAIKMAKCILLDESVVFSDELKA
LLEGALQKDGRDGDMTKLYEDVEREKAEAAARAAEEKARAEALAKEEEERKKAEAKAKEE
AAARASRAAIEAVLGRKKEGENDDSTVNVEEAQVVESHSDTNDITEENEGDDQKKSGDAL
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctctaagccgctcctctcccgcctcctccctctccctctccctctccgcccc
cacctccgcctcctctgcctcgctaccgcaacccccaccccggccccaaccccggccgac
gccgaccaggccaccccgaccgacgccgccgccgagcgccgccgccgcaagcgccgcctc
cgcgtggagccgcccagcgcacgcggcggtccggcgccgcagcgcgccccgggggcgccg
cgcccggcgtccaaccccaacgcgcccaagctccccgagccggcctccgcgctctccggc
aagcgcctcgacctccaccgccgcatcctcgcgctcgtccgcgaggacgacctcgacgag
gccgcgctgctcacccgccactccatctactccaactgcaggcccacggtgttcacctgc
aacgccgtcctcgccgcgctgctccgccaggcgcgctacgccgacctcctctcgctccac
cgcttcgtcacgcaggcctccgtcgcgcccaccgtcgccacctacaacctcctcctccag
gcctactgcgactgccgccgccccgacaccgcgctcgagcacttccgcctcctcctcaag
gacgactcccccgtcctcccctcgcccaccacctaccgcatcctcgcccgctccctcgct
gagaatgggaagcttgaacaggccatcgagctcaaagatgggatgctggagcgtggcctc
gttgcccctgatccccaggtgtacgcccttgtcatgggtggctttgtcaacgccggggat
ggcgacacagtggtctctctgtacgaggagcttgttgagaagctcggcggtgggcagatt
cttgatgggatggtttatgggaacttaatgaaggggtacttcttgaagggtatggagaaa
gaggccatggattgctacgcggaggtgcttggggagggttcgaaggtgaggtttggggct
gtgagttacaacatggtgctcgatgcccttgggaggaatgggaagttggacgatgcgctc
cagctgtttgataggatgtgcgaggagcatgatccaccaaggaggattgctgtgaacctg
gggagctttaatgtcatggtggatgcatactgccgggctgaaaggttccaggatgcgatt
gaggtgtttggtaagatgggtgagaagaggtgtgctccggatgcactctcctacaataat
ctgattgactggcttgggaagaatgaacttgttggggaggcggaacaattgtacaaggag
atgggtgagcgtggtgttaaccctgatgagtacacttatgtcttgctaattgagtcctac
tttaaggtggatagggtggatgactctgtttcttacttcaataagatgttcgttgctggc
ttgagacctaatgccaatgcatttaacaaagttattggtggcttggtgaaggttgatagg
cttgatgaggcacaggggttttttgataagatgccagaaaaggaagtcaagccaaatatt
ggtagctatgagctgttgttgagggcgtatattgatgctgcgaggttggatgatgcaatt
aagatggccaagtgtattcttttggatgagagtgttgtgtttagcgatgaattaaaggca
cttttggaaggggcactacagaaagatgggagagatggggatatgacgaagttgtatgag
gatgttgagagggagaaagcagaggcagctgcacgtgcagctgaagagaaggctagagcg
gaggctttagctaaagaagaagaggagaggaagaaggccgaggcaaaggccaaggaggaa
gctgctgccagggctagtcgagcagcaattgaggcagtgcttggtcgcaagaaggaaggt
gaaaatgatgattcaactgttaatgttgaggaggcgcaggttgttgagtcccatagtgac
accaatgatattacagaagagaatgaaggtgatgatcagaagaaatctggtgatgccttg
ccatag
DBGET
integrated database retrieval system
