Oryza sativa japonica (Japanese rice) (RefSeq): 4351597
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Entry
4351597 CDS
T01015
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
4351597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4351597
03036 Chromosome and associated proteins [BR:
osa03036
]
4351597
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
4351597
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
4351597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
4351597
NCBI-ProteinID:
XP_015618451
UniProt:
A0A8J8YE09
B9GC17
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All DBs
Position
12:3337997..3344233
Genome browser
AA seq
958 aa
AA seq
DB search
MFGSSNPFGQSSTSPFGQTSSNPFGAQTGGFGQANTTTTNPFAPKPFGSPITAFGAQTGN
SPFGTTSTGAFGQPSAPTFGSTSTGAFGQPSAPAFGSMSTGAFGQPSAPAFGSTSTGAFG
QPSTQAFGTPSSSPFGSSTPAFGASPAPVFGATSSTFGSGSSLFGQKPSFGGFGSSPSQS
SAFGGPFQQAQPAFGGSTFGAASTPTFGTTTTPSFGATTTPAFGTTTPAFGSTSTSVFGA
SSAPAFGSTGFGSSTTPGFGSSGTTAFGAGSTPGFGASSSGMSTSAFNFGSSPSFGQTIP
TFGSTPFGTTSSTFGSQTSTFGSQTTAPAFGQTSFGNQAGGTRIQPYTQTPDADSATSGT
QPAAKLNSISAMEAYKAKSHEELRWQDYQRGDKGGPNPSGTPAVTPSFPSPVNNQFSPNP
PNAFPSASANNPFAPKQPSTGFGSISSVFNSISSNTAPASSSPFAPTISNPFPTQTNCSQ
FVNSASSPSLFGTINQNSFSTSGTNSQSVGLFGPSPSIVQQPSQASSGFTSSFPSFSGSL
FSPPTPVATGGLFGSGPSPSTPTLQQPVPAQMPSILFQPPAQTASTGGFPGVSNTNQAPF
GQPTPSQSNMVMQPALVKNPFGMLPATPQMSIGNGGSAPSVQYGISSLPVAEKPHTSRAS
LSMVVPRHLSQRRIKLLPRKYNPISDGKVPFFADDEESPATPKADAFFIPRENPRNLVIR
PIDQWPSRGTMDRQQIPKNSADIDEHEGSLAEREFNKTAISPTRSTSIENGIHRDDRASN
EPDTVTRHGNGTSVERLAPKLVHADYYTEPSLEELAAKERAEPGYCSRVRDFAVGRHDYG
SIKFIGETNVRGLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAVVTLLNIKCMNKKT
GEQYTEGPRVGKYKEILVKKAEEQGAEFISFDAAKGEWKFRVKHFSSYGFGEAEIDSC
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcgagcaacccatttgggcagtcgtcgactagcccttttgggcagacctca
agcaacccattcggggcacagacaggcggatttggccaggcgaacactaccaccaccaat
ccttttgcgccgaaaccctttggcagcccgatcaccgcattcggggcacagacaggaaat
tcaccttttggcacgacgtccaccggagcctttggccagccatctgctccgacgtttggc
tcgacgtctaccggagcctttggccagccatccgctccggcgtttggctcaatgtccacc
ggagcctttggccagccatccgctccggcgtttggctcaacgtccaccggagcctttggc
cagccatccactcaggcgtttggcactccgtcatcctctccatttgggagctctacacca
gcttttggtgcatcaccagccccagtgtttggtgccacatcgtctacctttggcagcgga
tcatcattgtttggacaaaagccaagctttggcggttttggttcttctcctagccagtct
agtgcttttggaggtccattccagcaagcacaaccagcatttggtggcagcacttttggc
gcggcaagcacgccgacctttggcaccacaactacaccatcctttggtgccacaactaca
ccagcattcggcacgaccaccccagcatttggttcaacatctacatctgtattcggtgct
tcaagtgccccagcatttggttctacaggctttggttcatccaccactcctggttttgga
tcttcaggtactacagcctttggtgcaggtagtactccaggattcggagcttcaagctct
ggcatgtcaactagtgcttttaactttggctcttctccatcttttggtcaaacaatacct
acattcggtagcactccctttggaacaacttcatctacttttggctcacagacatctaca
tttggatcacagacaacagcaccagcatttgggcaaacatcatttgggaatcaagctgga
ggaaccagaatacagccttatactcaaacaccagatgcggacagtgctacaagtggtact
cagcctgctgcaaaattgaactcaatatcagccatggaggcatacaaagcgaagagtcat
gaagagctgaggtggcaagattaccagcgtggagacaaaggtggaccaaatccttcagga
actccagcagtgacccctagcttcccatctccagtcaacaaccaattttccccaaaccct
ccaaatgcatttccatcagcatctgcgaacaatccatttgctcccaagcagccttcaact
ggttttggttctatttcatccgtgttcaattcaatatccagtaatacagcaccagcaagc
tcaagcccatttgcaccaactataagtaacccatttcctacacaaacaaactgttctcag
tttgtaaattccgcttctagtccttctctatttggcacaataaaccaaaactcattcagt
acgtctgggactaacagtcaatcagttgggctatttggtccttccccatcaattgtgcaa
cagcccagccaggcatcatcagggttcacatcgagcttcccatctttttctgggagccta
ttcagcccacctactcctgtggcgactggtggattgtttggcagcgggccttcaccctca
acgccgacattgcaacaacctgtccctgctcaaatgcccagcattttgttccaacctcca
gctcaaacagcttctactggtggatttcctggcgtttccaatacaaatcaggcacctttt
ggacagccaacccctagccagtccaatatggtcatgcaaccagctcttgttaaaaatcca
ttcgggatgctgccagcgactcctcagatgtccattgggaatggtggatcagccccttct
gttcaatatggaatctcaagtttgccggttgctgagaagcctcatacgagcagggcgtca
ttatccatggtggttcctaggcatttgtcacagagaaggataaaattgctgccaagaaaa
tataatccgatatctgatggcaaggttccattctttgctgatgatgaagaatctcctgca
acaccaaaagctgatgcttttttcatccctagagagaacccaagaaatctggtaatccga
ccaattgatcagtggccttcacgtggcacaatggacaggcaacaaattccaaagaattca
gctgatattgatgaacatgaaggctctttggctgagagggagttcaacaagactgccatt
tcaccaaccaggtctacttcaatcgaaaatggcatccaccgtgatgaccgtgcatcaaat
gagcctgatactgtgacaaggcatgggaatggtacttctgttgagaggcttgcgcctaag
ctagtgcatgccgattattacacagagcctagtctggaggagcttgctgccaaagaacgt
gctgaaccaggctactgcagtcgtgtgagggattttgctgtgggacgtcatgattacggt
agcatcaagtttattggagaaaccaacgtgaggggccttgatctggagtccattgtggaa
ttcaataaccgtgaagtgatcgtgtacaaggacgatagcaagaagccccctgttggtgag
ggtctgaataaagctgccgtggtgacccttctcaatatcaagtgcatgaacaagaagacg
ggggagcagtacacagagggtccgagggtgggcaagtacaaggagatactggtgaagaag
gctgaggagcagggtgctgagttcatctcattcgatgctgccaagggcgagtggaaattc
agggtcaagcatttcagctcctatggctttggtgaagctgagatcgactcttgctag
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