Oryza sativa japonica (Japanese rice) (RefSeq): 9270411
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Entry
9270411 CDS
T01015
Name
(RefSeq) protein argonaute 1B isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
9270411
03036 Chromosome and associated proteins [BR:
osa03036
]
9270411
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9270411
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9270411
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9270411
microRNA pathway
RISC loading complex
9270411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
Gly-rich_Ago1
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9270411
NCBI-ProteinID:
XP_015636291
UniProt:
Q7XSA2
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All DBs
Position
4:complement(28426525..28441628)
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AA seq
1118 aa
AA seq
DB search
MALQLENGRPHHHQVPIMVKKKRTGSGSTGESSGEAPGAPGHGSSQRAERGPQQHGGGRG
WVPQHGGRGGGQYQGRGGHYQGRGGQGSHHPGGGPPEYQGRGGPGSHHPGGGPPDYQGRG
GSGSHHPGGGPPEYQPRDYQGRGGPRPRGGMPQPYYGGPRGSGGRSVPSGSSRTVPELHQ
APHVQYQAPMVSPTPSGAGSSSQPAAEVSSGQVQQQFQQLATRDQSSTSQAIQIAPPSSK
SVRFPLRPGKGTYGDRCIVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMFELVTL
YRYSHLGGRLPAYDGRKSLYTAGPLPFASRTFEITLQDEEDSLGGGQGTQRRERLFRVVI
KFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTTRYSPVGRSFYSPNLGRRQQL
GEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDR
VKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFLETYGF
SIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELD
ILRTVSHNAYHEDQYAQEFGIKIDERLASVEARVLPPPRLKYHDSGREKDVLPRVGQWNM
MNKKMVNGGRVNNWACINFSRNVQDSAARGFCHELAIMCQISGMDFALEPVLPPLTARPE
HVERALKARYQDAMNMLRPQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTK
HVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDS
SPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLISF
KRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHT
RLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDE
NKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGA
ATSRGLPPGVRSARVAGNVAVRPLPALKENVKRVMFYC
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagttggagaatggccgtccccatcatcatcaagtgcccatcatggtgaag
aagaaaagaactgggtctggcagcaccggtgagagttctggagaggctccaggagctcct
ggccatggttcttcacagcgagctgagagaggtcctcaacagcatgggggaggacgtggt
tgggtgcctcaacatggtggccgtggtggtgggcaataccagggccgtggtggacattat
cagggccgtggagggcaaggttcacaccatccaggtggagggcctcctgagtatcagggt
cgtggagggccaggttcacatcatccaggtggtgggcctcctgactatcagggccgtgga
ggatcaggttcacatcacccaggtggtgggcctcccgagtatcaaccgcgtgactatcaa
ggacgtggtggtccacgccccagaggtggaatgccacagccatactatggcggacctagg
gggagtggcggacgtagtgttccttcaggttcatcaagaacagttcccgagctgcaccaa
gccccacatgtccaataccaagccccgatggtttcaccaaccccatcgggagctggctca
tcctctcagcctgcggcggaggtgagcagtggacaagtccaacaacagtttcagcaactt
gccacccgtgatcaaagttcgaccagccaagccattcaaatagcaccaccgtcaagcaaa
tcagttagattcccgttgcgccctggcaagggtacatatggggacaggtgcattgtgaag
gcgaaccatttctttgctgaacttcctgataaagaccttcaccaatacgacgtatctatt
actcctgaggttacttcacgtggcgtgaatcgtgctgttatgtttgagttagtaacgctg
tatagatattcccatttgggcgggcgtctacctgcctatgatggaaggaagagtctttac
acagctggaccattgccatttgcttctaggacatttgaaattactcttcaagatgaggaa
gatagtcttggtggtggccaaggcacccaaaggcgtgagagactatttagggtggtgatc
aagtttgctgcccgtgctgatcttcaccatttggctatgtttctagctggaaggcaagca
gatgctcctcaagaagcccttcaagtccttgacattgtgttacgtgaattgcctaccaca
aggtactcaccagttggtcggtcattttattctcccaatttagggagacgccagcaactt
ggtgagggtttggaaagttggcgtggtttttaccaaagcataaggcctacccagatgggt
ctctcactgaatattgatatgtcatcaactgcatttattgagcctctacctgtgattgac
tttgttgctcagcttctgaacagagacatctcagttagaccattatctgattctgatcgt
gtgaagataaagaaagctctaagaggtgtgaaggttgaggtgacgcatagaggaaacatg
cgtagaaaatatcgtatatctggactcacttcacaggcaacaagggagttatcattccct
gtcgatgatcgtggtactgtgaagactgtggtgcaatattttctggagacatatggtttt
agtattcagcacaccactttgccttgccttcaagtgggcaatcagcaaaggcccaattat
ctgcctatggaggtttgtaagatcgttgagggacagcgttactcgaagcggcttaacgag
aaacagattactgcgctattgaaagtgacttgccagcgacctcaagagcgtgaactggat
attttgcggactgtatctcacaatgcataccatgaagatcagtatgcgcaggaatttggc
ataaaaattgatgagcgtcttgcatctgttgaagctcgtgttctgcctcccccaaggctt
aaataccatgatagtgggagagaaaaggatgtattgccgagagttggccagtggaacatg
atgaataagaaaatggtcaatggtgggagagtcaacaactgggcatgtattaacttctct
agaaatgtgcaagatagtgctgccaggggcttctgtcatgagctggctatcatgtgccaa
atatctggaatggattttgcactggaacctgtgctgcccccacttactgctagacctgaa
catgtggaaagagcactgaaggcacgctatcaagatgcaatgaacatgctcagaccgcag
ggcagggaacttgatttactgattgtaatactgcctgacaataatggttctctttatggg
gatctcaaaagaatctgtgagactgatcttggattggtctcccaatgttgtttgacaaaa
catgtttttaaaatgagcaagcagtatcttgcaaatgttgcccttaaaataaacgttaag
gtggggggaaggaatactgtacttgtggatgctttgacaaggaggattccccttgtcagt
gacagaccaactatcatatttggtgcggatgttactcatcctcatcctggagaagattcc
agtccttccattgcagctgtggttgcttctcaagactggcctgaagtcactaagtatgct
ggattggtgagtgcccaagcccatcgtcaagaattgatacaagatcttttcaaagtatgg
caagacccgcatagaggaactgttactggtggcatgatcaaggagcttctcatttctttc
aagagggctactggacagaaacctcagaggataatattttacagggatggtgtcagcgag
gggcagttttatcaagttttgttgtatgagcttgatgccattagaaaggcttgtgcatcc
ctggaacccaactatcagcctccagttacctttgtggtggtccagaagcggcatcacaca
aggttgtttgctaataatcacaacgaccagcgtactgttgatagaagtggaaacattctg
cctggaactgttgttgactcaaagatttgccatccaaccgagtttgatttctacctgtgt
agccatgctggcatacagggaacaagccgtcctgctcattatcatgttctgtgggatgag
aacaaatttactgcagacgagttgcaaaccctcacgaacaacttgtgctacacgtatgca
aggtgcactcgctctgtatcaattgtgcctcctgcgtactatgctcatctggcagccttc
cgagctcgcttttacatggagccagagacatctgacagtggatcaatggcgagtggagct
gcaacgagccgtggccttccaccaggtgtgcgcagcgccagggttgctggaaatgtagcc
gtcaggcctctacctgctctcaaggaaaacgtgaagcgtgtcatgttttactgctaa
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