Octopus sinensis (East Asian common octopus): 115211905
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Entry
115211905 CDS
T07665
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115211905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115211905
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115211905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115211905
NCBI-ProteinID:
XP_029636511
UniProt:
A0A6P7SEW2
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Position
LG5:complement(23368573..23382824)
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AA seq
217 aa
AA seq
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MNGEIKKQQLRKMSCELSLLSRPDGSASLSCGDTSMMASVYGPAEVKIAKEQINQATVEI
VYKPKSGMANCAEKLKENLICSTCETAILACLHPRSSISITIQELQNSGSLLACAINVVC
LSLLDASVNMNFMIAAVSCVFTENDQLILDPTLKEESSAPISMMFVFDSVSKSILAIHTS
GLFDKTKFNSALVACRAASDEIFTFYREIMQKNFSKS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaataaaaaaacagcagttacggaaaatgtcttgtgaactgagccttttg
tcacgaccggacggttcagccagtcttagttgtggtgatacctcaatgatggcctcagta
tatggcccagctgaagtgaaaattgctaaagaacaaatcaaccaagctacagtagaaatt
gtatataaacctaaatcaggtatggctaattgtgcagaaaaattaaaggagaatttaata
tgcagcacctgtgagacagcaatcttggcctgtttacatccacgttcttctattagtata
actattcaagaacttcagaattcagggtccctattagcttgtgcaataaatgttgtttgt
ctctcattattagatgcaagtgttaatatgaacttcatgatagcagctgtatcttgtgtc
ttcacagagaatgaccaacttattttggacccaacattaaaagaagaaagctctgcacca
atatcaatgatgtttgtatttgacagtgtctctaaaagcattcttgctatacatacgtct
ggattatttgataaaacaaaattcaactcagctttggtggcctgcagagcagcttcagat
gagatcttcactttttacagggaaattatgcaaaaaaatttttctaaatcatag
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