Ostreococcus tauri: OT_ostta02g03490
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Entry
OT_ostta02g03490 CDS
T01358
Name
(RefSeq) Armadillo-type fold
KO
K14290
exportin-1
Organism
ota
Ostreococcus tauri
Pathway
ota03008
Ribosome biogenesis in eukaryotes
ota03013
Nucleocytoplasmic transport
ota03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta02g03490
03008 Ribosome biogenesis in eukaryotes
OT_ostta02g03490
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
OT_ostta02g03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta02g03490
03009 Ribosome biogenesis [BR:
ota03009
]
OT_ostta02g03490
03016 Transfer RNA biogenesis [BR:
ota03016
]
OT_ostta02g03490
03036 Chromosome and associated proteins [BR:
ota03036
]
OT_ostta02g03490
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
OT_ostta02g03490
Ribosome biogenesis [BR:
ota03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
OT_ostta02g03490
Pre-60S particles
OT_ostta02g03490
Transfer RNA biogenesis [BR:
ota03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
OT_ostta02g03490
Chromosome and associated proteins [BR:
ota03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
OT_ostta02g03490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
9837097
NCBI-ProteinID:
XP_022840800
LinkDB
All DBs
Position
2:complement(683862..687492)
Genome browser
AA seq
1062 aa
AA seq
DB search
MGTTIEDVLAGDVEALDRCVERFYGSDPSARAEAEQTLQALQEHEQTWTKVDAILETSTN
ANTKFFALQVLDGVIKYRWGLLPNEQREGIKNFVSNLIIKLSADEATFRRDRAYINKINN
VLVQILKHDWPHRWQSFIPDLVGAARTGESLCENCMSILKLLSEEVFDFSRGEMTQDKIR
SLKTSLNSEFKMIHELCEFVLTHSQKPELIKTTLTTLNAFLSWIPLGYIFESTLLDTLLA
LAPNPAYRNIAFLCLAEIGALNVEAKYDAHFIKLYTTAITHLEGILPRGVNVAEAYANGS
DEEQAFVQNLGIFLTQFFKAHITLLESSGELQQKMLVGIEYLLNISYVEEPEVFKVCLDY
WHFMVCDVFQSDGSSGADADFRFGNEFGVANAERGANRRVLYSAPFSKLRLLMISRMAKP
EEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLAHLDHKDTETLMLEKLHAQLNGR
DYTWHTLNTLCWAIGSISGSMQEDQENRFLVTAIRDLLNLCEIMRMKDHKAVIASNIMYV
VGQYPRFLRLHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKISMKCKRKFVILQVGEN
EPFVDELLRGLSDTIRDLEPHQVHSFYESVGHMIGSELNPAKREEYVQRLMAPPNMQWQQ
IMTQARQNSECLKNQDIIKNILHILKSNTHLCMSLGQPFQNQMSAIYADVLNVYKLYSEL
VSQSIAQGGPYASKSSLVKLLRSVKREVLRLIETFVERCDDPHLVAQQLVPQMYDPILGD
YARNIPDARDAEVLSLFAAIINKVEGAMTDEIPKIFDAVFECTLSMITKNFEDFPDHRLK
FFLLLRSVTNHCFRALVALSPAHLKLIIDSIIWAFRHTERNVADEGLNLLLEMMKYFQLS
EYCNQFHQSFYLMTMSEIFAVMTDGFHKPGFKLHALILQNLFAISESDQLSAPLWDVATK
GASAYPSNAAFVQEHCAQLLCTSFPNMPPTEVQTLVLGMFQCKNDLAAFKSTLRDFLVQT
KQFSSVDFAEEEQSRLAAQRQARLSAIPGMVQNAADMDDDEE
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggggacgacgatcgaggacgtcctcgcgggcgacgtcgaggcgctcgatcgatgcgtc
gaacggttttacgggagcgacccgagcgcgcgcgccgaggcggagcaaacgctccaggcg
cttcaggagcacgaacagacgtggaccaaggtggatgcgattttagagacgtcgacaaac
gcgaacacgaaatttttcgcacttcaggttctggacggcgtcatcaagtaccgctgggga
ttgctgccgaacgaacagagagaggggatcaaaaactttgtgagcaacttgatcatcaag
ctgagcgcggacgaggcgacgttccgaagggatcgggcgtatattaacaagattaataac
gtgttggtgcagattttgaagcacgactggccgcatcgctggcagagcttcatcccggat
ttggtcggcgcggcgaggacgggcgagtcgctgtgcgaaaactgcatgagcattttgaag
ttgttgtccgaggaagtattcgattttagccgcggtgagatgacgcaagacaagattagg
tcgttgaaaacgtcgctgaacagcgagttcaagatgattcacgagctgtgcgagttcgtg
ttgacgcactcgcaaaagccagagttgataaagacgacgctgacgacgcttaacgcgttc
ttgtcctggattccgctcggttacatctttgaatcgacgctcctggacacgttgctggcg
ctcgcaccgaatccggcgtatcgaaacatcgctttcctctgtctcgccgagatcggtgcc
ttgaacgtcgaggccaagtacgatgcgcacttcatcaagctctacaccacggccatcacg
cacttggagggcatcttaccacgtggcgtcaacgtcgcggaggcgtacgcgaatggctcg
gatgaagagcaggcgttcgtacaaaatcttggcatattcttgacgcaattctttaaagcg
catatcacgcttttggaatcgagcggcgagttgcagcaaaagatgctcgtcggcattgag
tatctcttgaacatttcctatgtggaggaaccggaggttttcaaggtatgcctcgattac
tggcacttcatggtgtgcgacgtgttccagtccgacggatccagtggcgcggacgcggac
ttccgattcgggaacgaattcggcgtcgcaaacgccgagcgcggcgctaaccgccgcgtg
ctctactcggcgccattcagcaagctgcgtctattgatgatctcccgaatggccaagccc
gaggaagtgctcatcgtcgaagatgagaacggtaacatcgtccgagagacgcttaaggat
aacgatgtgttggttcagtacaaaattatgcgtgaaacgttgatttacctcgcacacctc
gatcacaaggacaccgagacgcttatgctcgagaagcttcacgcacaactgaatgggcgg
gactacacgtggcacaccctgaacacgctctgctgggccatcggttccatcagtggttcg
atgcaagaggatcaagagaatcgcttccttgtcactgccatccgcgatttgctcaactta
tgtgaaatcatgcgcatgaaggatcataaagccgtcatcgcgtccaacatcatgtacgtc
gtcggacagtacccgcgcttcttacgattgcactggaaatttttgaagactgtggtaaac
aaattgtttgagttcatgcacgaaacgcacccgggtgtccaagacatggcttgtgacact
tttctgaaaatctcaatgaagtgtaagcgcaagttcgtgattttgcaagtcggtgagaac
gagccgtttgttgacgaactcttacgaggtctttcggacaccatccgtgacttggagccg
catcaagtacactctttctacgaatccgtcgggcacatgattggcagcgagttgaatcca
gcgaagagagaggaatacgttcagcgattgatggctccgccgaacatgcagtggcagcaa
atcatgacacaggcgcgacaaaactctgaatgcttgaaaaatcaggatatcatcaagaac
attctgcacatcctcaagtcgaacacgcatttgtgcatgtccctcggacagccgttccaa
aatcaaatgtctgccatttatgcggacgtgttaaacgtctacaagttgtacagcgaactc
gtgagccagagcatcgcgcagggtggtccgtacgcgagcaagtcttccctcgtcaagctg
cttcgttcggtcaagcgtgaggtgcttaggctcattgaaacgttcgttgagcgttgcgat
gatccgcatttggtcgctcagcaactcgtgccgcagatgtatgacccgatcctcggcgac
tacgcgagaaacatcccggatgctagggacgccgaggtgctgtccctcttcgcggcgatc
atcaacaaggtcgagggcgcgatgacggacgaaattccaaagatcttcgatgccgtgttc
gagtgtacgctctcgatgatcacgaagaatttcgaagacttccccgatcatcgtttgaag
ttcttcttgcttcttcgttcagtgacaaaccattgcttccgtgcgctcgtagccctgagc
ccggcgcacttaaaactcatcatcgactccatcatttgggcattccgtcacacggagcgc
aacgtcgcggacgagggtttgaatttgctcttagagatgatgaagtatttccagctttcg
gagtactgcaaccagttccatcaaagcttttacctgatgacgatgagcgaaatttttgcc
gtcatgacagatggtttccacaaaccgggtttcaaactgcacgcgctcatcctacaaaat
ctctttgctatcagcgaaagcgatcaactgagcgcgcctctttgggacgtcgccacgaag
ggagcgtccgcgtatccttcgaacgccgcattcgtgcaagaacactgcgctcagctgttg
tgcacgtcgttcccgaacatgcccccgacggaggtccaaaccttagttctcgggatgttc
cagtgcaagaatgatttggcggcgttcaaatcgacacttcgggatttcttggttcaaaca
aaacaatttagcagcgtggatttcgcggaagaggagcagagcagattagccgctcagcgc
caggccagactttccgcaatccccgggatggtacagaacgccgccgatatggatgacgac
gaggagtga
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