Ostreococcus tauri: OT_ostta03g03140
Help
Entry
OT_ostta03g03140 CDS
T01358
Name
(RefSeq) tRNA wybutosine-synthesis
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
ota
Ostreococcus tauri
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ota03016
]
OT_ostta03g03140
Enzymes [BR:
ota01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
OT_ostta03g03140
Transfer RNA biogenesis [BR:
ota03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
OT_ostta03g03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Hydrolase
Motif
Other DBs
NCBI-GeneID:
9833693
NCBI-ProteinID:
XP_003078225
LinkDB
All DBs
Position
3:518099..520117
Genome browser
AA seq
672 aa
AA seq
DB search
MSTSRPALEGPLAFALGVSVLGCGFVLGARAAAMTLEYAVGRAGDAGTRARERAATALDS
TSTTGKNLVVYMTTGGTSERFARALATRAAKATGERWTTMDGGDVDDPENTLGGERGITT
VVFVVSTDTGGAAPKRGAWLARWARETAYDERAGWMYLKNLRYAVFGCGNREYGDDFNRV
GRALDAHLARMGAERLVRRRDGDEATGRMEAQFEDWAEKVVKRLASSSRASDVVAKGGLF
EESTSTDDVEGGCGSQDEDALSIAGSEDGQDMEDIGENEGGEPKEMVTPALRGALTKQGY
KILGSHSGVKICRWTKAMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCTFCWRHHTN
PVGKSWRWKMDEPLELVEQAISEHCKMVKQMKGVPGVLPEKLAEGMEPKHCALSLVGEPI
MYPEIAKFVSELHSRKISTFLVTNAQFPEAIVDLPPITQLYVSVDAATPETLKAVDRPLF
VDYWDRFVNSLKSLKMKQQRTVYRLTLVAGYNMEDIAEYAKLIDLGQPDFIEIKGVTFCG
SSDTSSLTMKNVPYHKDVCKFGEAIVNMRRRENGEEEYGLACEHAHSCCILLARTDKYKI
DNEWYTWINYDKFQRLVVKGEKFTAADYIERTPKWATYGAVEAGFDPEQTRHIKIRNHPG
KDKTAPLIQGEA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctctcgccccgcgctcgagggcccgctcgcgttcgcgctgggagtgagcgtt
ctgggatgcggattcgtcctcggtgcgcgcgccgccgcgatgacgctcgagtacgcggtg
ggacgggcgggcgacgcggggacgagggcgagagaaagagcggcgacggcgttggattcg
acgtcgacgacggggaagaatctggtggtgtacatgaccacgggggggacgagcgagaga
ttcgcgcgcgcgctcgcgacgcgcgcggcgaaagccacgggcgagcggtggacgacgatg
gacggcggtgacgtggatgatccggagaatacgctcggtggagagcgtggaataaccacg
gtggtgttcgtcgtgagcacggataccggaggggcggcgccgaagcgaggggcgtggctc
gcgcggtgggcgcgcgagacggcgtacgacgagcgggcgggttggatgtatctgaaaaat
ttacgttacgcggtgtttggttgcgggaacagggagtatggggatgattttaatcgtgtc
ggacgtgcactcgacgcacatctggcgcggatgggcgcggaacgattggtacggcgacgg
gacggggacgaagcgaccgggcgcatggaggcgcagtttgaggattgggcggagaaagtt
gttaaaagactcgcttcttcgtcccgtgcgagcgatgtcgtcgccaaaggaggtttattc
gaagaaagcacgtcgacggatgatgttgaggggggttgtggaagccaggacgaggatgca
ctgagcattgcagggagcgaggacggtcaagacatggaggacatcggtgagaatgaggga
ggcgagccaaaagagatggtcacgcccgctctcagaggagcgctcacgaagcaagggtac
aagattcttggttctcactctggcgttaagatctgtcgatggacaaaggcgatgcttcgg
ggtcgcggagggtgctataagcacaccttctacggaatagagagccatcgctgcatggag
accacaccatcgttggcttgtgcaaataaatgcacgttttgttggcgacatcacacgaat
ccagttgggaaatcatggcgatggaagatggacgaaccgttggagctcgttgagcaggct
atttcagaacactgcaaaatggtgaagcaaatgaaaggggtcccgggagtcttacccgag
aagcttgcagaaggaatggagccaaagcactgcgctctttcactggtcggtgagcctatc
atgtacccggagattgcaaaatttgtcagtgaactgcattctcggaagataagtacgttt
ctcgtgacgaatgcccagttccccgaggcgatagttgacctgcccccaatcactcagcta
tatgtttcagtagatgccgcgacgccagaaacgctcaaggccgtcgacagaccacttttt
gtagattattgggatcgattcgtgaactcactcaagtcgttgaagatgaagcagcagcgg
accgtgtatcgtttgacgctcgttgctggttacaacatggaggacatcgctgagtacgcc
aagctcatcgaccttggacaacccgacttcattgagatcaagggagtgacattctgtgga
agcagcgacacatcgtcgctaacaatgaaaaacgtcccttatcacaaagatgtctgcaag
tttggagaggcaatcgtcaatatgaggagacgggaaaacggagaggaagagtacgggttg
gcgtgcgagcacgctcactcgtgctgcatcttgctcgctcggacggataagtacaagatt
gataacgagtggtacacgtggattaattacgataaatttcaacgtctcgtggtcaagggg
gagaagtttacagccgcagattacatcgagcgcaccccgaaatgggccacttacggagcg
gtggaagctgggtttgatccagagcaaactcggcacatcaaaattcgaaaccatccaggg
aaagataaaaccgcaccactgattcagggtgaggcttag
DBGET
integrated database retrieval system
