Ostreococcus tauri: OT_ostta04g05410
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Entry
OT_ostta04g05410 CDS
T01358
Name
(RefSeq) Translation elongation/initiation factor/Ribosomal, beta-barrel
KO
K14416
elongation factor 1 alpha-like protein
Organism
ota
Ostreococcus tauri
Pathway
ota03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OT_ostta04g05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta04g05410
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
OT_ostta04g05410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D2
Roc
Ras
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
9834089
NCBI-ProteinID:
XP_003079073
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All DBs
Position
4:908067..909848
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AA seq
593 aa
AA seq
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MSRKGGWGRDDDDYYDAYDDDDDGFDESESDGETVTVTTTTTTTTTKTFETMKTAPTHRT
VGKEEIAARRRAEENARHPGGGKTSARGTFAFDAPSPDAAAKAARKRGTTSAETTQTRAE
GLTREFDVKARVGGGDGAFDGYEPSSAERAAYASEDGDVHVVVMGHVDAGKSTLSGRVLY
ALKAVDDRAVHKNLRDAKASGKSSFAWAWVMDSRPEERERGVTIDVSVKRCTLDERRQLV
VLDAPGHRDFVPSAISGMAQADAGILVIDGAVGGFENGFEVTTGHTGQTREHARLAKYLG
LHSLIVVVNKMDCVEYSLERFQHIVDALTRFLVGDVGFGAEQLTFVPASGMEGVNISPDD
FALPEVLKAWYRGPTLVDALRSIKIPSRGEPKPLRLPIADVVTEVRSLGATACGGKIESG
SVFKGQKVSIMPANITATIKCIEIDGLPVDFAGVGASVDVGLSDVDPLHLQVGSVLCHTA
YPMTSTNEIEISVLTTEVLRVPLLKGSKVVLHSHMLSCDATVDQLIAQVDALTGAVIKPN
PRCITREQSAILRLKTSQNVCVEPVEVSPTLSRVTLRMGGKTMAVGVVRAIWR
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtaagggtgggtggggacgcgacgatgacgattactacgacgcgtacgacgac
gacgacgacgggttcgacgagagcgagagcgatggggagacggtgacggtgacgacgacg
acgacgacgacgacgacgaaaacgttcgagacgatgaagacggcgccgacgcaccggacg
gtgggaaaggaagagatcgcggcgcggcgacgggcggaggagaacgcgaggcatccgggg
gggggcaagacgagcgcgcgcgggacgttcgcgttcgacgcgccgtctccggacgcggcg
gcgaaggcggcgaggaagagaggaacgacgagcgcggagacgacgcagacgcgagcggag
gggttgacgagagagttcgatgttaaggcgcgcgttggggggggcgatggcgcgttcgat
gggtacgaaccgtcgagcgcggaacgcgcggcgtacgcctcggaggacggcgacgtgcac
gtggtggtgatgggacacgtcgacgccgggaaatcgacgctgagcggacgcgtcctctac
gcgctcaaggctgtggacgatcgcgcggtgcataagaatttaagggacgccaaggcgagc
ggcaaatcgtccttcgcctgggcgtgggtcatggactctcgaccagaggagcgcgagcgc
ggggtgacgatcgacgtgagcgtcaaacgatgcacgttagacgaacgtcgacagctcgtt
gttttggacgcaccaggacacagggatttcgtgccgagcgccatctccggcatggcccag
gcggacgccggaattttagtcatcgacggcgccgtgggtggatttgaaaacggattcgag
gtcaccaccggtcacactggacaaacacgtgagcacgcgcgcttggcgaaatatcttggt
ctgcactctctcatcgtagtggtgaacaagatggactgcgtcgagtactcgctcgagcgt
tttcaacacatcgtcgacgcgctcacgagatttctggtcggcgacgtcggcttcggcgcc
gagcagttgacgttcgtcccagcttcgggcatggagggagtgaatatatcgccggacgat
ttcgccttaccggaagtcttgaaggcgtggtaccgaggaccgacgctcgtggacgctctt
cggtcgatcaagattccgtcgcgcggcgagcccaagccgcttcgcctaccgatcgcggac
gttgtcacggaggttcgttctctcggtgcgaccgcctgtgggggtaagattgagtcggga
agcgtattcaaaggtcaaaaggtgtcgataatgccagcgaacattacagcgacgatcaag
tgcatcgagattgacggattacccgtggacttcgccggcgtcggcgcctccgtcgacgtc
ggattgagtgatgtcgatccgttgcacttgcaagtggggagtgttttgtgccatacggcg
tatccgatgacttccacgaacgagatcgagattagtgttctcaccaccgaagttcttcgc
gttccgcttctgaagggctccaaggtggtgttgcactcgcacatgctgtcgtgcgacgcg
acggtggatcaactcatcgcgcaagtggacgcgctcacaggtgccgtgataaagccgaac
cctaggtgtattacgcgcgaacagagcgcaattttgagattgaagacgtcccaaaacgtg
tgcgtcgagcccgtcgaagtttctccgacgttgagccgcgttactttgcgaatgggcggt
aaaacgatggcagtcggcgtcgttcgcgcgatttggcgatga
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