Ostreococcus tauri: OT_ostta13g02260
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Entry
OT_ostta13g02260 CDS
T01358
Name
(RefSeq) Translation elongation/initiation factor/Ribosomal, beta-barrel
KO
K03231
elongation factor 1-alpha
Organism
ota
Ostreococcus tauri
Pathway
ota03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ota00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OT_ostta13g02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ota03019
]
OT_ostta13g02260
03016 Transfer RNA biogenesis [BR:
ota03016
]
OT_ostta13g02260
03012 Translation factors [BR:
ota03012
]
OT_ostta13g02260
04131 Membrane trafficking [BR:
ota04131
]
OT_ostta13g02260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ota04147
]
OT_ostta13g02260
Messenger RNA biogenesis [BR:
ota03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
OT_ostta13g02260
Transfer RNA biogenesis [BR:
ota03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
OT_ostta13g02260
Translation factors [BR:
ota03012
]
Eukaryotic type
Elongation factors
OT_ostta13g02260
Membrane trafficking [BR:
ota04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
OT_ostta13g02260
Exosome [BR:
ota04147
]
Exosomal proteins
Proteins found in most exosomes
OT_ostta13g02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
9837507
NCBI-ProteinID:
XP_003082709
LinkDB
All DBs
Position
13:388350..389753
Genome browser
AA seq
467 aa
AA seq
DB search
MSEGKEHLSIVICGHVDSGKSTTTGRLLFELGGIPERELEKLKAEADALGKSSFAFAFYM
DRQKEERERGVTISCTTKEFFTEKWHYTIIDAPGHRDFIKNMISGAAQADVALLMVPADG
NFTVAIQKGNHKAGEVQGQTRQHARLLNLLGVKQLIIGINKMDCDMAGYKQERYEEIRNE
MKNMLIKVGWKKDYVEKSVPVLPISGWNGDNLLKKSEKMAWWNGVDVEGYDGKGAKFHID
TLLNVLNDMVDRPDRNTEAQMRLPISGVYKIKGVGDVLAGRVEQGLVKPGEDVVFLPTHT
SSNPCGGKVFTVEMHHKRVEAAAPGDNVGMNIKGLDKLNMPRTGDVMIYKKDTSLAPCKN
FTAQVQTLDIPGELKVGYSPIGFVRCGRSACKLTALNFKVGKETGGKKLESPMSLKSNEV
AECVFEPVHPLVVDSFKKCEGLSRIAFLDGNTAVMLGKITNVEYKAI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggcaaggaacacctttccatcgtcatctgcggccacgtcgactctggtaag
tcgaccaccactggtcgcctactgttcgagctcggcggtatcccggagcgtgaactcgaa
aagctcaaggctgaggccgatgcgctcggcaagtcctctttcgccttcgcgttctacatg
gatcgccaaaaggaagagcgtgagcgtggtgtgaccatctcctgcacgaccaaggagttc
ttcaccgagaagtggcactacaccatcatcgatgccccgggtcacagagatttcatcaag
aacatgatttccggtgccgcccaggcggacgtcgccctcctcatggtcccggccgacggt
aacttcaccgtcgccatccaaaagggtaaccacaaggctggtgaagtgcaaggccaaacc
cgccagcacgcccgtcttctcaacttgctcggcgtcaagcagctcatcatcggtatcaac
aagatggactgcgatatggctggctacaagcaagagcgttacgaagaaattcgcaacgaa
atgaagaacatgttgatcaaggtcggctggaagaaggactacgtcgaaaagtccgtcccg
gtcctcccgatctccggctggaacggtgacaacttgttgaagaagtccgaaaagatggcc
tggtggaacggtgtcgacgttgaaggctacgacggcaagggcgccaagttccacattgac
accctcctcaacgtcctcaacgacatggtcgaccgcccggaccgcaacacggaagcgcaa
atgcgcctcccgatctccggtgtctacaagatcaagggtgtcggtgatgtcctcgccggc
cgcgtcgagcaaggcctcgtcaagccgggtgaagatgtcgtcttcctcccgacccacacc
tcctccaacccgtgcggtggtaaggtgttcaccgtcgaaatgcaccacaagcgtgtcgaa
gccgccgcgccgggtgacaacgtcggtatgaacatcaagggtctcgacaagctcaacatg
ccgcgcaccggtgacgtcatgatctacaagaaggacacctccctcgccccgtgcaagaac
ttcaccgcgcaagtccaaactttggacatcccgggtgaactcaaggttggctactccccg
atcggtttcgtccgttgcggtcgctccgcgtgcaagctcacggcgctcaacttcaaggtt
ggcaaggaaaccggcggtaagaagctcgagtccccgatgtcgttgaagtccaatgaagtc
gccgagtgcgtcttcgaaccggtgcacccgctcgtcgtcgactccttcaagaagtgcgaa
ggtctttcccgcatcgccttcttggacggtaacactgcggtcatgctcggtaagatcacg
aacgtcgagtacaaggccatctaa
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