Ottowia testudinis: J1M35_00145
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Entry
J1M35_00145 CDS
T08188
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
otd
Ottowia testudinis
Pathway
otd00550
Peptidoglycan biosynthesis
otd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J1M35_00145 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otd01002
]
J1M35_00145 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
otd01011
]
J1M35_00145 (dacB)
Enzymes [BR:
otd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J1M35_00145 (dacB)
Peptidases and inhibitors [BR:
otd01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
J1M35_00145 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
otd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
J1M35_00145 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Phage_Coat_B
Motif
Other DBs
NCBI-ProteinID:
QTD47206
UniProt:
A0A975H5B7
LinkDB
All DBs
Position
25457..26989
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AA seq
510 aa
AA seq
DB search
MRGVTLRPLFPRRCTGLLLAALALAGSARAQAPLPPDIAQALNKAGVPASAVAMVVAPLP
PPPGTVTRAPEPVNPGGERNPAPAAASMALPPPRLSWQADLPMNPASVMKLVTTYAGLDK
LGPGHFWRTRVYTQGYVSNGVLNGNLLIQGSGDPKLVVERLQELMRAIQDKGVRQIKGDI
LLDNTIFRLPAHDAAAFDDDPLRPYNVGPDGLLLNFKALVFKFIPDPAGRRVRVETEPPI
AGVAIPAEVPAAGGACGNWRSRLAADFSNPNQVVFAGRYPSSCGEQSWSIAYPDPASYAP
RVIEALWRTAGGALTGQVKWADRPATGQPLVTGFSLPLADIIADINKFSNNVMAQQMFLT
LSAGDGRASLAESQNTLRRWWRERFGLRTTPIVENGSGLSRNERITAASLTALLQQAAGH
PNGAVFEHSLSIAGVDGTTRRMAARAPGSAAIGNARLKTGTLRDVTAIAGYAYGLSGHNY
AVVGIINHPNAGAARPALDRLVEWAVRDTP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ctgcgcggcgtgacgcttcgacccctcttcccgcgccgctgcaccggcctgctgctggcc
gcgctggccctcgccggcagcgcccgcgcccaggcacccctgccgcccgacatcgcccag
gccctgaacaaggctggcgtgcccgccagcgccgtggccatggtggtggcgccgctgccg
ccgccgcccggcaccgtcacgcgcgcgcccgagccggtcaacccgggcggcgagcgcaac
ccggcacccgcagccgccagcatggccctgccgccgccgcgcctgagctggcaggccgac
ctgccgatgaacccggcctcggtgatgaagctggtgaccacctacgccgggctggacaag
ctcggccccgggcatttctggcgcacgcgcgtctacacgcagggctacgtcagcaacggc
gtgctgaacggcaacctgctgatccagggcagcggcgaccccaagctggtggtcgagcgc
ctgcaggagctgatgcgcgccatccaggacaagggcgtgcggcagatcaagggcgacatc
ctgctcgacaacaccatcttccgcctgcccgcgcacgacgccgccgccttcgacgacgac
ccgctgcggccctacaacgtcgggccggacgggctgctgctcaacttcaaggcgctggtc
ttcaagttcatccccgacccggcgggccggcgcgtgcgggtggaaaccgagccgccgatc
gccggcgtggcgatcccggccgaggtgcccgcggccggcggcgcctgcggcaactggcgc
agccggctggcggccgatttcagcaacccgaaccaggtcgtgttcgccggccgctacccc
agcagctgcggcgagcaaagctggagcatcgcctaccccgacccggccagctacgcgccg
cgcgtgatcgaggccctgtggcgcaccgccggcggcgccttgaccggccaggtcaagtgg
gccgaccgccctgccaccggccagccgctggtgacgggtttttcgctgcctctggcggac
atcattgccgacatcaacaagttctcgaacaacgtgatggcgcagcagatgttcctcacg
ctgtcggccggcgacgggcgcgccagcctggccgaatcgcaaaacaccctgcgccgctgg
tggcgcgagcgctttggcctgcgcaccacgcccatcgtcgaaaacggctcgggcctgtcg
cgcaacgaacgcatcaccgccgcctcgctgaccgcgctgctgcaacaggccgccgggcac
cccaacggcgcggtgttcgagcattcgctgtcgatcgccggcgtggacggcaccacgcgc
cgcatggccgcacgcgcgccgggatcggcggccatcggcaacgcccggctgaaaaccggc
accctgcgcgatgtcacggcgatcgccggttatgcctacggcctgtcgggccacaactac
gcggtggtgggcatcatcaaccaccccaacgcgggcgctgcgcggcccgcgctggaccgg
ttggtggagtgggcggtgcgggatacgccgtag
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