Ottowia oryzae: C6570_07335
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Entry
C6570_07335 CDS
T05363
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otk03009
]
C6570_07335
03016 Transfer RNA biogenesis [BR:
otk03016
]
C6570_07335
Enzymes [BR:
otk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
C6570_07335
5.4.99.29 23S rRNA pseudouridine746 synthase
C6570_07335
Ribosome biogenesis [BR:
otk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C6570_07335
Transfer RNA biogenesis [BR:
otk03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
C6570_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AVO34079
UniProt:
A0A2S0MDW6
LinkDB
All DBs
Position
complement(1565983..1566936)
Genome browser
AA seq
317 aa
AA seq
DB search
MSRPRRPAALPLLDGVSASCAVVHGGPWPSALDFLTARLPVLHRDEWAERFARGEVLDAQ
GAALAASAPCREGQRLFYYRRLEAEPAAPEAPRVLHQDDTLVVVDKPHFMPVTPGGRFIQ
RSLLVQLKRMLGLLDLAPLHRIDRETAGLVMLAVRPDVRAAYQALFRDRRIDKLYEAVAP
DVPALATPRTHASRLQEDAQRFFLSCEVPGEPNSCSHVQRVAPVGSAGHALYQLRPITGQ
RHQLRLHMLALSAPILGDTFYPTVLHGPHSEADDLMRPLQLLARELAFEDPLTGQRRVFR
SQRQLAGAVGAWPAAAP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccgcgccgccccgccgcactgccgctgctggacggcgtgagcgccagctgc
gccgtggtgcatggcggcccctggcccagcgcgctggattttctgaccgcgcgcctgccg
gtgctgcaccgtgacgaatgggccgagcgcttcgcacgcggcgaagtgctggacgcgcag
ggcgccgccttggcggccagcgcgccgtgccgcgaaggccagcggcttttctactaccgc
cgcctcgaagccgaacctgccgcgcccgaagcgccgcgcgtgctgcaccaggacgacacc
ctggtggtggtcgacaagccgcacttcatgcccgtcacgccgggcggccgcttcatccag
cgcagcctgctggtgcagctcaagcgcatgctgggtctgctcgacttggcaccgctgcac
cgcatcgaccgcgaaaccgccgggctggtgatgctcgccgtgcgtccggacgtgcgcgcc
gcctaccaggcgctgtttcgcgaccggcgcatcgacaagctgtacgaggccgttgccccc
gacgtgcccgcgctggccacgccccgcacgcacgccagccgcttgcaagaggatgcacag
cgcttctttctgtcatgcgaagtgccgggcgagcccaacagctgctcgcacgtgcagcgg
gtggcgccagtcggcagcgccggccacgccttgtaccagctgcgccccatcaccgggcaa
cgccaccagctgcggctgcacatgctggcgctgagcgcgcctattctgggcgacaccttt
tacccgacggtgctgcacggcccgcacagcgaggcggacgacctcatgcgcccgctgcag
ctgctggcgcgcgaactggcgtttgaggacccgctgacggggcagcggcgggtgttccgc
tcgcagcggcagctggcgggcgcggtgggcgcttggccggcggctgccccatag
DBGET
integrated database retrieval system
