Ottowia oryzae: C6570_10130
Help
Entry
C6570_10130 CDS
T05363
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
otk
Ottowia oryzae
Brite
KEGG Orthology (KO) [BR:
otk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otk03009
]
C6570_10130
03016 Transfer RNA biogenesis [BR:
otk03016
]
C6570_10130
Enzymes [BR:
otk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
C6570_10130
5.4.99.29 23S rRNA pseudouridine746 synthase
C6570_10130
Ribosome biogenesis [BR:
otk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C6570_10130
Transfer RNA biogenesis [BR:
otk03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
C6570_10130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AVO34542
UniProt:
A0A2S0MF72
LinkDB
All DBs
Position
complement(2184584..2185270)
Genome browser
AA seq
228 aa
AA seq
DB search
MVVVHEDAHLLVLDKPSGLLAVPGRGPDRADCLSARAQQRWPDALIVHRLDQATSGLIVL
ARGIDVQRCLSAAFAERRVHKRYEALVHGQMVLPAVPDGDATQATSPDIADDDDRASEWA
LIDLPLIVDWPRRPRSKVDPLLGKPSRTRWRPLAYDAATHTTRVALEPITGRSHQLRVHL
LAQGHPIVGDALYDAPDQAPRLMLHACTLALRHPVTDAPLRFASAVPF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgtcgtgcacgaagacgcgcacctgctggtgctggacaagcccagcggcctgctg
gccgtgcccggccgcgggccagaccgcgccgattgcctgagcgcccgcgcccaacagcgc
tggcccgacgcgctcatcgtgcaccggctggaccaggcgaccagcggcctgatcgtgctg
gcgcgcggtatcgacgtgcagcgctgcctgtccgccgcctttgccgagcggcgcgtgcac
aagcgctacgaggcgctggtgcacgggcaaatggtgctgcccgccgtgccggacggcgat
gccacgcaggctacctccccggacattgccgatgacgacgaccgcgccagcgagtgggcg
ctgatcgacctgccgctgatcgtcgactggccgcgccgcccgcgcagcaaggtcgatccg
ctgctgggcaaacccagccgcacgcgctggcgcccgctggcgtacgacgccgccacccac
accacgcgcgtcgcgctggaacccatcaccggcaggtcgcaccagctgcgcgtgcacctg
ctggcgcaaggccacccgatcgtgggtgacgcgctgtacgacgcgcccgaccaggcgccg
cgcctgatgctgcacgcctgcaccctggccttgcggcatccggtgacggacgcgccgctg
cgctttgccagcgcggtgccgttctag
DBGET
integrated database retrieval system