Oncorhynchus tshawytscha (Chinook salmon): 112214640
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Entry
112214640 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11846
ubiquitin carboxyl-terminal hydrolase 18/41 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112214640
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112214640
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112214640
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112214640
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112214640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Peptidase_C98
TPPII_Ig-like-1
CAMSAP_CC1
Motif
Other DBs
NCBI-GeneID:
112214640
NCBI-ProteinID:
XP_024229314
LinkDB
All DBs
Position
LG09:60432688..60439740
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AA seq
391 aa
AA seq
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MLCLGIYIINNNSQYVFYFFQLPVYNTPHLATYAYYCRFQARREKMSSKENPPKKKGCDK
GIVKRFKMRLDLIFDYNGLVNQGATCYLNSVLQVLFMTKNFREAVESHCGQDQKTADFHL
KSLFKALKTSETHTKDILSILGIRNVYEQRDAAEYFENILSMVNPYVSKIFKGHLRHTMR
CSEGHVTSVETGPFWTLPLSIENPSDSNKTYSVRDGFEKFFKSSTVSEMYCDQCNEKTYS
TIACKMEHHPEILTLLLKRFEFDYHSMSYTKNDCCVEVPHTLRTKNCDYELYAVVDHVGS
LRGGHYTARIKSYDDHNWYVFDDSYVRQPNPQSISHMNNERSQSVYLLMYKKSRAPDQPE
EEIKKRGGIKVYGRGMEENRRRIEENKRGME
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtttggggatatacattattaataacaactctcaatatgtgttttattttttt
cagttgcccgtatacaatacgccacatctggccacatatgcgtattactgtagatttcaa
gcgaggcgcgaaaaaatgagttccaaggagaatcctccaaagaaaaaaggatgcgacaaa
ggcatcgtgaagaggtttaaaatgagacttgacctcatatttgactacaatggcttagtt
aatcaaggagcaacctgttatttaaacagtgtgctgcaggtcctcttcatgactaagaac
ttcagagaggctgtggaaagtcactgtggtcaagatcagaagactgctgattttcacctg
aaaagcctttttaaggcattgaagacaagtgaaactcacacaaaggacatcttatccata
cttggcattagaaatgtttacgagcaacgggatgctgctgaatattttgagaatatttta
agcatggtcaatccttatgtgtctaagatcttcaaaggacatttgagacacacaatgaga
tgttcagaaggtcatgtgaccagtgttgaaactggtccattctggactctgccactctca
atagaaaatccatcagactcaaacaaaacctacagtgtgagggatggttttgagaagttt
ttcaagtcttcaactgtcagtgagatgtattgcgaccaatgcaatgagaaaacctattca
accattgcatgtaaaatggaacatcacccagagattctgactctgctcctcaagaggttt
gagtttgactaccacagtatgtcatataccaaaaatgactgctgtgttgaagttcctcac
acgttacggacaaagaactgtgactatgaactctatgcagtggtggaccatgtgggaagt
ctaagaggtggacattacactgctagaatcaagtcctatgatgatcacaactggtatgtg
ttcgatgacagctacgtcagacagcccaatccacaatcaatcagtcatatgaataatgaa
agatcccagagtgtgtatctgcttatgtacaagaaatcacgtgctccagatcaaccagaa
gaggaaattaagaaaagaggaggaattaaagtgtatggaagaggaatggaagaaaataga
agaagaattgaggaaaataaaagaggaatggaataa
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