Oncorhynchus tshawytscha (Chinook salmon): 112215649
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Entry
112215649 CDS
T05605
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2 isoform X1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112215649
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112215649
04261 Adrenergic signaling in cardiomyocytes
112215649
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112215649
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112215649
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
112215649
NCBI-ProteinID:
XP_024230619
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Position
LG16:complement(40263979..40395586)
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AA seq
857 aa
AA seq
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MICSHILFVHQSGGNKSFRKNIFAQTAPPSQAFPIVVRLKLKTAKQRLRNIGASHFTSAP
PKSLSHNYFYSFGRYFVSNKKIGSTFGRDRGVTHDHRPLKNFIFYLNDRPTVGCQMVHNN
LQNTHSLLDRHMDSLENPGLQSHGKGARRKGRFKGSDGSTSSDTTNNSFVRQGSADSYTS
RPSDSDVSLEEDKEAVRREAERQAQTQLDKAKTKPVAFAVRTNVNYCATNDDGVPVPGMA
ISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKIENTRVQHEQRAKQGKFHSSK
SGANSSTSLGEVVPNSRKSTPPSSAVDIDATGLDPEDNELPVHLRSPKVSQPNTVMSPTL
AKDKRMPFFKKTEHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRIS
ITRVTADISLAKRSVLNNPSKHAIIERSNTRSNLVAEVQSEIERIFELARTLQLVVLDAD
TINHPAQLGKTSLAPIIVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPAEM
FDIILDENQLEDACEHMADYLEAYWKSTHPASCNPPNPLLAKLATDALPSSPAPVSSMQG
SGAEEKAGDKAGQGGERKGSREDHQHHHHHHSQHQSQEQPDGEGEGEEEREEEERPLRTE
SSRRPQHIHHRSSSQRTEQHHNHHHHHHRGGGGGGGRGKGLSRGETQDSETPESRESRES
RDSAYIEPLSQLLHQEEEDDFGEEYDEEGLGEGGHPQQQQVRYEAQPQPRDHHHHHHHHH
RAGEEAGHSTIGHHRSKERNEQDHNERNKPRSHQHQRPARDHHHHQYYDRDRDREGEVAP
KKRGDTEDWARDPYIHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcagtcatattttatttgtgcaccaaagcggaggaaacaaatccttcaggaaa
aatatttttgcgcaaactgctcctccttcccaagccttcccgattgtggtccgactcaaa
cttaagactgcaaagcagaggctgagaaacataggagcgagtcacttcacttctgcgcca
ccaaagtctctttcacacaactatttttattcatttggacgttacttcgtgtcaaacaaa
aaaatcggctctacatttggaagagatcggggagtcacgcatgaccaccgacccttgaaa
aattttattttctatctcaacgatagaccgactgttggatgtcaaatggtccataataac
ttgcaaaatacgcactcacttttggacagacacatggattcgctcgaaaaccctggacta
caatcacatggaaaaggagcacggagaaaaggcagattcaaaggatcagacggcagcacc
tcttcagatacaacaaacaacagctttgtgcgacagggttcggcggactcctacaccagc
cgtccatcagactccgatgtttccctggaggaggataaggaggcagtgcgacgagaggca
gagcggcaggctcagacacagctcgacaaggccaagactaaaccagttgcatttgctgtc
cgcacaaatgtcaactactgcgccaccaatgatgatggcgtccccgtgccgggcatggcc
atctcctttgaggctaaagacttcctccacgtcaaagagaaatttaataatgactggtgg
ataggtcgtctggtgaaggaaggctgtgaaatcggtttcatccccagtcctgtgaagatc
gagaacactcgggtacaacacgagcagagagccaaacagggcaagttccactccagtaaa
tcgggagcaaactcctctaccagtttaggtgaagtggttcctaactcgcggaaatccacc
cccccttcctctgccgttgacatagacgccacaggcttagaccccgaggacaatgagctt
ccagtccaccttcgctcccctaaagtcagtcagccaaacacagtcatgtcacccacccta
gccaaagacaaacgaatgcccttctttaagaagacggaacacattcctccatacgacgtt
gtgccttccatgcgacctgtggtcctggttggaccgtcactgaagggctacgaggtgaca
gatatgatgcaaaaagcactgtttgactttttgaaacacagatttgagggaagaatatca
atcactcgagtcactgcagacatctctcttgccaaacgctccgtcctcaacaaccctagt
aaacacgccatcatcgagcgatccaacacacgctccaaccttgtagctgaagtgcagagt
gagatagagcgtatctttgaactggcccggaccttacagctggtggttctggacgcagac
accatcaaccacccggcccaactgggcaagacatccctggctcctatcatcgtctacgtc
aagatctcctctcctaaggttctgcagaggctcatcaagtccagagggaagtcccaggct
aagcacctcaatgtccagatggttgccgcagacaaactggcccagtgccctgccgagatg
tttgacatcatcctggatgagaaccagctggaggatgcgtgtgagcacatggctgattac
ctggaggcctactggaagagcacccaccccgccagctgcaacccccccaacccgctgctg
gccaagctggccacagacgccctgccctccagccccgctcccgtctccagcatgcagggc
agcggggcagaggagaaagcaggggacaaggcaggacaaggtggggagaggaagggctcc
agagaggaccaccagcaccaccatcaccaccacagccagcatcagagccaggagcagcca
gatggggagggggagggggaggaggagagggaggaggaggagaggcccctaaggacagag
tcttccaggagaccccagcacatccaccaccgctcctcctcccagcgaactgagcagcac
cacaaccaccaccaccatcatcatcgtggtggtggcggtggtggtggccggggcaagggt
ctctcccggggggagacacaggactcagagacccccgagagccgggagagcagagaaagt
agagactcagcgtacatagagcctctgtctcagctcctacaccaggaagaggaggatgat
tttggagaggagtatgacgaggaggggcttggagagggagggcacccccagcagcagcag
gtgcgctacgaggcccagccccaacccagggaccatcatcatcaccaccaccaccatcac
cgcgctggcgaggaggcgggccacagcacaataggacaccaccgttctaaggagcgtaac
gagcaggaccacaacgagcgcaacaagccgcgcagtcaccaacatcaacgaccggcccgc
gaccaccaccaccaccagtactatgaccgcgaccgggacagggagggggaggttgccccc
aaaaagaggggtgacacagaggactgggccagagacccctatattcaccagtga
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