Oncorhynchus tshawytscha (Chinook salmon): 112222333
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Entry
112222333 CDS
T05605
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112222333
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112222333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-Nse
zf-RING_5
U-box
zf-RING_6
DUF4618
PEHE
RE_Alw26IDE
Motif
Other DBs
NCBI-GeneID:
112222333
NCBI-ProteinID:
XP_042160038
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Position
LG22:complement(33247980..33256469)
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AA seq
473 aa
AA seq
DB search
MASKASLSEDDFSCPVCCDIFNDPVVLLCSHSFCKACLEEYWKQKTSWECPVCRKKSSME
FPPCNLVLKNLCEAYLHDRSQRASAGPEVLCSQHSEKLKLFCLEDKQPICLVCQTSKKHK
SHDCCPIDEAVLDHKEELKTSLKPLQEKLKVFREVKLICDQTTNHIKSQTQHTERLIKMR
FEKLHQFLYHEERARIAELKEEEEQKSQMMKKKIEKMSREISSLSDTIRAIEEELGAEDI
SFLQNYKDTVKRAQCTLPDPERVSGALIDVAKHLGNLQFRVWKKMQGVVHYTPVTLDPNT
SHPHLILSDDLTSVRYSDEKQQLPDNPERFDEEETVLGFEGFNSGTHSWDIDVGENIYWY
LGVITESVQRKGDSGYWDGSWGVLFGGGDYKTHVPKQPLTPLTVRQNPQRIRVQLDWEGG
KLSFSDPVNNTHLHTFTHTFTERVLPFICTGFCPLPLRVLPGKVSVSVDTVSV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagcttctctctccgaggatgatttctcctgtccagtatgctgtgacatc
ttcaatgatcctgtggtcctgttgtgtagccacagcttctgtaaagcctgtctggaggaa
tactggaaacagaagacatcttgggaatgtccagtctgcagaaagaaatcatcaatggaa
ttccccccctgtaacctggttttaaagaacctgtgtgaggcctacttacacgatagaagc
cagagagcttcagcagggcctgaggtgctctgcagtcaacacagtgagaaactcaagctc
ttctgtctggaggataaacagcccatctgtttggtgtgtcaaacttcaaaaaagcataaa
agtcatgactgctgcccaatagatgaagctgtactggatcataaggaggaactcaagact
tcactgaagcccttacaggagaaattgaaggtcttcagagaagttaaactgatctgtgac
caaacaaccaaccacatcaaaagccagacccagcacacagagaggctgattaagatgagg
tttgagaagcttcatcagtttctatatcatgaagagagagccaggatagctgaactgaag
gaggaagaggagcagaagagtcagatgatgaagaagaagattgagaagatgagcagagag
atatcatcactttcagacacaatcagagccatagaagaagagctgggagctgaggacatc
tcattcctgcagaactacaaggatacagtgaaaagagcccagtgtacactgccagatcca
gagagggtttcaggagcgctgatcgatgtggcaaagcacctgggaaacctgcagttcaga
gtctggaagaagatgcagggagtagttcactacactccagtgactctggaccccaatact
tcccacccacatctcatcctgtctgatgatctgaccagtgtgagatacagtgatgagaaa
cagcagcttcctgacaacccagagaggtttgatgaggaagaaactgtcctgggttttgaa
ggttttaactcaggaacacacagctgggacattgatgttggggagaatatatactggtac
ctgggtgtgatcacagagtctgtccagaggaagggagacagtggatattgggatggatcc
tggggtgtgttgtttggtggtggtgattataaaacacatgtaccaaagcagccactcact
cccctcacagtgagacagaatccccagaggatcagagtgcagctagactgggaaggagga
aagctgtcattctctgaccctgtcaataacacacatctacacacattcacacacactttc
actgagagagtccttccattcatctgcactggcttttgtcccctccctctcagggtttta
ccagggaaggtatctgtatcagtggatactgtctctgtctga
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