Oncorhynchus tshawytscha (Chinook salmon): 112224591
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Entry
112224591 CDS
T05605
Name
(RefSeq) zinc finger CCCH domain-containing protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
zf-CCCH_2
Torus
DUF6277
Motif
Other DBs
NCBI-GeneID:
112224591
NCBI-ProteinID:
XP_024243997
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Position
LG25:29305516..29321593
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AA seq
1316 aa
AA seq
DB search
MASVSLVSSPPTPVVVLDKNMTDSELAEEEREDGELEDGEIDDEGIGIEEESKEEVKEVN
EEKEEKVKEKEKEKEKDIEKEDKTHRHSRKRYKKTREKRRSKRRRRDSRKHHSPSSSSSS
DSYESSLERPERDRPKNKKNQDRSHRGGDYDGQSAQHGCDPSSGGHGNPQRSERSAGRHR
SGSGDYDKYSDYSEDKYDYEGEGGDYDEEEMWQGKDSISPSQGLGRGRGSKDQMKRGGMK
GMQKQQQQQFGGQRGRGRGSGVGGRGRGNMLNKNNKKQMQQMKGNKNWGRGRGRGGGAEQ
AGEGMKQEGGGKGPPGGFQKKRPIMTKEFINQHTVEHNGRYICKYFLEGRCIKGDQCKFE
HELVTPDKKKELCKFYLQGYCSKGDNCIYMHSEYPCKFFHTGAKCYQGDNCKFSHDPLND
VTKDLLDKIINTEEEIAHEDEMELEDLRKQGIAPLPKPPPGVGLLPTPGPGGPGSGGPNP
GPGPSSPQEGGSSGGNSGGKKIPSLFEIVVKPTVDLAQKIAQSGSNFNCQSGGQFPSDEF
GGGGPDDNIQQSGPNGPPPVLPPGSPPGSMGGPSPPYPSHTGPPMQQQQNPPGQHPQHQP
PHGFPMPPPPGPPPPFLGHRPNMNLNPNMNMNLQRPPPPFPPFPDPMQMLQNMNVPFQTM
GAVGQNPAEFFNNFFRNQAQAMGQGDMGMPFSQNTSQQQGSADSQMLSQMQGLPPAVQKA
LLLHLQQQQGSEPQGFEEQGGKTPKDDSTNWYSSDDEDGNCVTAILKSLKKQNEKLQQGP
QSIKHPSVPQLAPGDPRLQKERAPPSDPRMKAADPRQRPPDMRKEPDSSGGPRQARDPRK
VRPLEPPNSFKPELHHHRQQHHHHNKAPAREEDEDGERELRERAALIPLDSCPGVMLRDP
RCQLQQFSHIRVDVVLQRPAYASTVVWSAEDLIPSLVPKQEHSINLPLPPLIADAQMNRT
NNRTRTLSPDHSTITTSTTPPHMDPRLVAARLKEGVLGVGVGLGRLPSRTLEPRGSTERL
LDPRQHKALGVDPRIGRSGSVDTKLPILRETERGGGGGGGAGGDPRLQRSSASGTSSSKT
TTLTFSAPAPAPSKSEAEKPEKLCPYAPGRLSSSGGGLESPTTSTLLGGISLYDPRNQAP
QQGQRDETEPTRKTGILKLPAKRENNTNTKTPPSSSLSPTQRSGGSVSTQDVKGGTESAM
DGSGSKSRPPPTLSSAPTVTMSGSEPPSSPVKSSAPAVHHLPIQALAGLIRPPYTDPRQV
KQVEKEAKQQEEKELEEKGEEEEKVEEAKEKEETEDDRPLKDVFKTFDPTASPFSQ
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgagcctggtctccagtcccccaacccccgttgttgttcttgacaaaaac
atgacagactctgagcttgcagaggaggaaagagaggatggtgaattggaagatggagaa
atagatgatgaagggattgggattgaagaggagagcaaagaagaagtcaaagaagtgaat
gaagaaaaggaagagaaagtaaaagaaaaggagaaagaaaaggaaaaagacatagagaaa
gaagacaagacacacaggcactccagaaaaagatacaaaaaaacaagagagaagaggagg
tcaaagagaaggagacgcgacagtcggaaacatcactccccctccagtagctccagttct
gacagctatgagtcttccctggagagaccagagagagacaggcccaagaacaagaagaac
caagacaggtcacaccgtggtggtgactatgatggccagtcagctcagcatgggtgtgat
ccatcaagtggtggccatggcaacccacagaggtcagagaggtcagcaggccgacacagg
agtggtagtggtgactatgacaagtacagcgactacagcgaagacaagtatgactatgag
ggagaggggggtgattatgatgaggaggagatgtggcaggggaaagactctatatctcct
agccaaggcctgggcaggggacgcggttccaaggaccagatgaagagaggtggcatgaag
ggcatgcagaaacaacaacagcagcagtttggtggtcagcgggggcggggcagaggaagt
ggagtgggaggaagggggcggggcaacatgctcaacaagaacaacaagaagcagatgcag
cagatgaagggcaacaagaactgggggcgtggccgggggcgaggcggcggggccgagcag
gccggagaggggatgaagcaggagggtggtgggaagggccctccgggtggttttcagaag
aagcgccccattatgaccaaggagttcattaaccaacacacggtggaacacaacgggaga
tacatctgtaaatacttcctggagggacgatgtatcaagggggaccagtgtaagtttgaa
catgagctggttactccagacaagaagaaggagctgtgtaaattctacctccaaggatac
tgcagtaaaggagacaactgcatctacatgcacagtgaatatccctgtaagttttttcat
actggagccaagtgttatcagggagacaactgtaaattctcgcatgatcctttgaatgat
gtgaccaaagacctgcttgataagataatcaacacagaggaggagatcgcccatgaagat
gagatggagttggaggacctgaggaaacaggggattgcccccctgcctaaaccccctcct
ggggtggggctgctgcccacaccgggtcccggtggtcctgggtctggaggtcctaaccct
ggtcctggaccctccagcccacaggaggggggaagcagtggggggaactccgggggaaag
aagatcccctctctgtttgagattgtggtgaaacctacagtggacctggctcagaagatt
gctcaaagtggatccaacttcaactgtcagtctggaggccagtttccgagtgatgagttt
ggtggagggggtcccgatgacaacatacagcagagtggacccaatggcccaccccctgtc
ctccctccggggtctccccctggctccatggggggtccctctcctccctatccatcccac
actgggccaccaatgcagcaacagcagaacccccctggacagcacccccaacaccaacca
ccccatgggttccccatgccaccacctcccggtccgccaccacccttcctgggtcaccga
ccaaatatgaacttgaaccccaatatgaacatgaacctccagaggccccctccaccgttc
cctccattcccagaccccatgcagatgcttcagaacatgaacgtgccgttccaaaccatg
ggagccgtgggccaaaaccctgcagagttctttaacaacttcttcaggaaccaggctcag
gccatgggccaaggagacatgggtatgcctttcagtcagaacacgtcccaacagcagggg
agcgctgactcccaaatgctgtcccagatgcagggcctaccccctgcagtacagaaggcc
ctgctcctacacctacagcagcagcaaggcagtgagccacaaggttttgaggaacaaggt
ggcaaaacccctaaagatgactctactaactggtattccagtgatgacgaggatgggaac
tgtgtcacggccattcttaagtctctgaagaaacagaatgagaagctccagcaggggcca
cagtccatcaaacacccctctgttccccagttggcccctggagaccccaggctccagaag
gagcgggccccacccagcgacccccgtatgaaggcagcagacccccgccagagaccacca
gacatgaggaaagagcccgactccagcgggggccccagacaggccagggaccccaggaag
gtgaggcccctggagccacccaactccttcaaaccagagctccaccaccatcgccagcag
caccaccaccacaataaggctccagccagagaggaggatgaggatggggagagggagcta
agagaacgggctgctctcatccctttggattcctgcccaggggtgatgctccgcgaccca
cgctgccagctgcagcagttcagccacatccgtgtagacgttgtgttacagcgcccagcc
tatgcctcaaccgtggtctggtcggctgaggatctcatcccctcactggtgcccaaacag
gagcactccatcaatctacctctaccgcccctcatcgctgacgcacagatgaaccgaacc
aacaataggaccaggactttatcccctgaccactccaccataaccacctccaccacccct
ccacacatggaccctcgcctggtcgctgcccgtctgaaggagggtgtgctgggtgtgggg
gttggactaggcaggctcccctccaggacactggagcccagggggtcaacagagaggttg
ttggatcccaggcaacacaaggccctgggtgtggacccccggataggtcggtcaggtagt
gtggacactaagctccctatcctgagggagacggagagaggtggtgggggaggtgggggt
gctggaggagaccccaggttgcagaggagcagtgctagtggaacctcttcctccaaaacc
actacgttaacattttcagccccggcgccagctccatctaaatctgaggctgagaagcca
gagaagctgtgtccgtacgccccagggcgcctgtcctcttccggtggtgggttagagagc
ccaaccacctccactctgctagggggcatcagcctttatgaccccagaaaccaggcacca
cagcagggccagcgggacgagacagagcccacgaggaagactgggatcctcaaactacca
gccaagagagaaaacaacactaacactaaaactccaccatcatcctcgctctcgccaacc
cagcgatctggagggtctgtatccacacaggatgtcaagggcggtaccgagagcgccatg
gatgggtctgggtccaaaagtcgtccacctcctaccctctcctctgctcctacagtgaca
atgtcagggtcggagcctcccagctccccagtcaaatcctccgcccccgcggtccaccac
ctacccatccaggccctcgcaggcctgatcaggcccccctacacagaccccagacaggtc
aaacaggtagagaaggaggccaagcagcaggaggagaaggagctggaggagaagggagaa
gaggaggagaaggtggaggaagcaaaggagaaggaggagacagaagacgataggccgctg
aaagacgtattcaagaccttcgaccccactgcctcccctttcagtcagtaa
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