KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112226602
Entry
112226602         CDS       T05605                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112226602
   04121 Ubiquitin system [BR:otw04121]
    112226602
Enzymes [BR:otw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112226602
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112226602
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112226602
SSDB
Motif
Pfam: KH_1 zf-C3HC4_3 zf-RING_2 zf-C3HC4 KH_2 Prok-RING_4 Mito_fiss_reg zf-RING_5
Other DBs
NCBI-GeneID: 112226602
NCBI-ProteinID: XP_042163739
LinkDB
Position
LG28:8702068..8711021
AA seq 653 aa
MPSPLFHPEIMDHDMVVSSQHNGVSLPRETDQESQDEDHQDALRFALDQLSFMALEKVDC
GGGGGGLVDTLDGNQGPCSGNSNGGYVDLQMLEHQGGSRDSPTSCSPSPEYYGSGGYHMT
GPHSHPMLGEQSSVLCNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGATGTGAPGTGGVLPGPP
HLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVD
RAREEIETHITLRTGAFVDLQGDNDFHTNGTDVSLEGLGSLAGGLGAALWARANNAHPAP
PPPPPPPPPPLPMAMHQSSGRKLSSSASYHQHNGGMGSESYSAPRRATEGGSPTSPFSTS
SSNAGGGGGFTFGGDSTPGLPSEELGFEFSASNIWAPFVNGGGGKIPGTSQKQPLRRNSS
GLSGGAITPRLSPTLPPDAVVGTLDHPLARRAQSDPLSTLSWLQSGGAGAGSFSGASSSS
SGGSSTGYSSCSASSLPGGSPTDSEGGGSGLGSGMLGRLKAAAGAGSGGLVCMGPGGVSR
DCFVCFESEVTAALVPCGHNLFCMDCAGQICQSAEPECPVCHTTATQCIRIFS
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcctagccccttattccaccccgagattatggaccacgacatggtagtgagcagccag
cacaacggggtcagcctgccgcgagagactgaccaggagtcccaggacgaggaccatcag
gatgcgctccgcttcgccctggaccagctgtcatttatggccctggagaaggtggactgt
gggggcggtggtggggggctcgttgacacgctcgacgggaaccagggaccgtgctccggg
aattccaacggcggttatgtcgacctgcagatgctggagcaccaagggggttcccgggac
tccccgacatcctgctccccgtctccagagtactatggatcgggcgggtaccacatgact
ggcccgcactctcaccccatgctcggtgaacaaagctcagttctctgcaatcgtaagagg
agtgtcaacatgaccgaatgcgtacctgtgcccagctcagaacacgttgctgaaatagtg
ggaagacagggctgtaagatcaaggcactgcgtgcgaagaccaacacctacataaagacc
ccggtgagaggcgaggagcctgtgttcatagttacagggcgcagggaggacgtggagatg
gccaagcgggagatcgtctctgcggccgagcacttctccatgatccgggcatcccgctgc
aaggctggggccacgggcacaggagcacccgggacagggggagtgctccctggacccccc
cacctgcctggacagaccactatacaggtgcgggtaccgtatcgtgtggtggggttagtg
gtggggcccaagggggcgaccatcaagcgcatccagcagcagacgcacacctacatcgtg
acgcctagcagggagaaggaccccgtgtttgaggtgactggcatgcctgagaatgtggac
cgagcccgggaggagattgagacgcacatcaccctgcggaccggggcctttgtggacctc
cagggagacaatgacttccacactaacgggactgatgtcagcctagagggcctgggctcg
ctggctggggggctgggcgctgctctctgggctcgggccaacaacgctcaccctgcccct
ccacccccgccgcctcctccaccacccccgctccctatggccatgcaccaatcgtctggg
aggaagctgtcctcctctgcctcctaccaccaacacaacggagggatgggctctgagagc
tacagcgcccccaggagggccaccgagggaggtagccccaccagcccattcagcactagc
tccagcaatgccggcggaggaggggggttcaccttcgggggtgactccaccccaggcctc
ccctctgaggagctgggctttgagttcagcgcctccaacatctgggcccctttcgtcaac
ggaggaggagggaagatcccaggtacctctcagaagcagcctctccgcagaaacagcagc
ggcctgagcggcggtgccatcaccccccgcctgtcccccaccctgccccctgacgcagtg
gtgggaaccctggatcatccactggcccgtcgtgcccaaagcgacccactcagcaccctc
tcctggctgcagtcgggcggtgccggtgcagggtccttctctggagcatctagctccagc
tccggagggtcatccaccggttactcctcctgctcagcctcctccctgcccggaggctct
cccaccgattcagagggcgggggcagtggcctgggctctggcatgctgggccggttgaag
gccgcggcaggcgctggttctggaggtctggtttgcatggggccagggggtgtgagcagg
gactgctttgtgtgctttgagagcgaggtgacagcggctctggtgccatgcggccacaat
ctgttctgcatggactgcgccggacagatctgccagtccgctgagcccgagtgccctgtc
tgccataccactgccacacagtgcatccgtatcttttcctaa

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