Oncorhynchus tshawytscha (Chinook salmon): 112226965
Help
Entry
112226965 CDS
T05605
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112226965
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112226965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
Death
DNApol_Exo
Motif
Other DBs
NCBI-GeneID:
112226965
NCBI-ProteinID:
XP_024247452
LinkDB
All DBs
Position
LG28:24588987..24673538
Genome browser
AA seq
1594 aa
AA seq
DB search
MGWFIQVLFSFTCLAVFSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPHSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKTNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKKNGFGKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLPCNSNGKSAECYFDPELYRATGHGGHCRNCADYT
DGPNCERCLDNYYRDTSGTRCLPCSCNPVGSLATQCDNTGRCNCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFSCDRCKLGYFNMDLQNPQGCTP
CFCFQHSSVCDSAEGYSIDTTSSTFNRDDEQWTGQQRDSSSVSVRWSTGGEISLISDDYF
PMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PGENMQTFVFRLHDSTDYPWRPTLTHSEFQKLLHNLTSIKIRGTYSERSAGYLDDVKLIT
AKRGPGSPARWVEKCTCPQGYLGQHCESCAPRYRRSRPDLGPFSSCDSCNCNGHSDACHP
DTGMCNCLHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTNC
PTGTTGKRCELCDDGFFGDPLGGNRQVRVCRACKCSDNIDPNAVGNCDRETGECLKCIYN
TDSFFCDRCKEGFYGNPLATNPNDKCKACSCSPYGTVDRQTSCLQVTGQCQCFPHVTNRD
CSACQPGFFNLRSGTGCEQCNCNSIGSTNGQCDIGSGQCECQPGVTGQRCERCEVNFFGF
GLSGCKPCDCDPEGSSTAQCKEDGRCACLPGFVGARCDMCEENYFYNRSTPGCQQCPSCY
SLVRDKVNQQRQKLHDLQTLIDNLGSMSETVSDKAFEDRLKEAEKSIMDLLDEAQTSKDV
DKGLLERLGKLNSTLTTQWNRLQNIRNTVDNTGTQADKARNRVRDAENLIGLAREELDKA
KDAISKLDIKAPSISGDPNNITLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNLL
TKTLDGEGKTNQDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSLP
PFNTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQTA
DQLLARVDAAKALAEEAAKKGRTTYQEAQDILGNLRDFDKRVNDNKTAAEDAMKRIPEIN
ATIIAANEKTKQAEGALGNAAADAKEAKSKAEEAEKIASAVQKGSAKTKADAEKAFEDTM
MLDGEVNGMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVLN
TINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQEEMITDY
DRQIREIRSDIANLNDIKNTLPDGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtttattcaagttttgttttcatttacttgtttggctgtcttcagccacagt
gctatggatgaatgcactgacgattcgagtcgtcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctccaccagaagaa
tactgcgtacaaaccggggttacgggggtcaccaagtcgtgccacatctgcgatgccagg
gatcgcagacaacaccacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcaaactatgttagcgggcatccagtatccacactcaatcaatcta
actcttcatcttggcaaggctttcgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccttac
cagtactacagtggctcctgtgagaagacctaccagaagaccaacaggggcttcatccgc
accggagaggacgaacaacaggcactgtgcacagacgagttcagtgacatctcacccctg
actggaggaaacgtggccttctccacccttgaaggccggcccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaggtgaccctgaacagg
ctcaacacattcggagatgaagttttcaatgatcccaaggtcctgaaatcttactactac
gctatctcagactttgcagtgggaggaaggtgcaagtgcaatggccatgcgagtgagtgt
gtgaaaaagaacggtttcggcaagccggtttgcaactgcaagcacaacacggagggcgat
gactgcaatgtgtgtaagccgttctacaacgaccgtccctggaggagagctacagccaat
aaccctaacgagtgtctgccgtgcaactctaatggcaagagtgcagagtgctacttcgac
cctgagctctaccgtgccaccggccacggaggacactgccgcaactgtgccgactacaca
gacgggcccaactgtgagcgctgcctggacaactactacagagacacatctggcacccgc
tgcctgccctgcagctgcaacccagtaggctctctggctactcagtgtgacaacacaggg
cgctgcaactgtaaacccggtgtgatgggggacaagtgtgaccgctgccaacctggcttt
cacacgttgaccgaagcaggctgcagaccttgctcctgtaacccttccggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcagctgt
gacaggtgtaagctgggctacttcaacatggacctgcagaaccctcagggttgcactccg
tgcttctgcttccagcattcctctgtctgtgacagcgctgaaggctacagcattgacaca
acatcctccaccttcaaccgagatgatgagcagtggacaggccagcagcgtgacagctcc
agtgtttcagtccggtggtccactggtggggagatctccctcatctccgatgactacttc
ccaatgtactttgtggctccagagcgattcctgggcaatcagctgctgagctacggccag
aacctcaccctgaacttccgggtggacaggagagacacacgtctctcggccgaggatgtg
gttctggagggggctggtctcagagtggctgtgcctctcattgctcagggaaatgcctat
cctggagagaacatgcagacgtttgtgttcaggctccacgacagcacagactatccctgg
aggcccaccctcactcactcagagttccagaagcttctgcacaatctgacgtccatcaag
atccgtggcacctacagcgagagaagtgctggttaccttgacgatgtgaagctgatcacg
gcgaagagaggtcccgggagcccggctcgctgggtagagaagtgtacctgccctcaaggc
tacttgggacagcactgtgagagctgcgccccgagatacaggaggagcagaccagacctg
gggcccttcagttcctgtgactcctgcaactgtaacggacacagtgacgcgtgccacccc
gacacagggatgtgtaactgcctacacaacacagctgggctcagttgtgagagatgtaaa
gacggttactatggagactccactgtggggagttccagcgactgcaagccctgcccctgc
cccggaggatccacttgtgctgttgtgcccaagaccaaggaggttgtctgcaccaactgt
cctactggaaccacaggcaagcgctgcgagctgtgtgatgacggtttcttcggagacccc
ctgggggggaaccggcaggtgagggtctgtcgggcctgtaagtgtagcgacaacatcgac
cccaacgctgtgggcaactgtgacagagagaccggggagtgcctcaagtgtatctacaac
acagacagcttcttctgtgaccgttgcaaagagggcttctatggaaacccgctggccacc
aaccccaacgacaagtgcaaagcctgctcctgctctccatatggcacagtggacagacag
accagctgtctacaggtcacaggccagtgccagtgtttcccccacgtcaccaacagggac
tgcagcgcctgtcagcctggcttcttcaacctgcggagcggaacaggctgtgaacaatgc
aactgcaattctattgggtccaccaacggtcagtgtgacatcggttccggtcagtgtgaa
tgccagcccggcgtcaccggtcagcgctgtgaacgctgtgaggtcaacttcttcggcttc
ggattgtcaggctgcaaaccgtgcgactgtgacccagagggctcctcgacagcccagtgt
aaagaagatggccgctgtgcgtgccttccaggctttgtgggagccaggtgtgacatgtgt
gaggagaactacttctacaaccgctctactcccggctgccagcagtgtccgtcctgttac
tccctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagactttg
attgacaacctgggctccatgtcagagactgtgagtgacaaggcgtttgaggaccgactg
aaggaggcagagaaatccatcatggacctactggacgaagctcagaccagcaaagatgtg
gacaaaggcctgctggagcgcctggggaaactgaacagcacactgaccactcagtggaat
cgtttgcagaacatcaggaacactgtggacaacactggaacccaagccgacaaggcccgc
aaccgggtccgagacgccgagaacctgatcggcctcgcccgcgaggaactggataaggcc
aaggatgccatcagcaaactggacatcaaagcaccctccatcagtggagatcctaacaac
attacccttctggcagaggaggctcgcaatctggcagacaaacataaaatggacgcggat
caaattgagaagatcgcaaaagatgccaatgacacgtccaccaaggctctcaacctgctg
acaaagactctagatggcgagggcaagaccaaccaagacattgatgagctcaacaggaag
tacaatgaggcaaaggacctggccaagaacctggagaaacaggccaacaaggtgcatgct
gaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgacaagcctgcca
cctttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaagcgtctgac
cttgacaagctgattgacaagaccgagaaagagtacaacgacttgagggatgatctgcga
gggaaggagactgaggtccgcaagctgctggagaagggcaagacggagcagcagactgcc
gatcagttgctggctcgtgtcgatgctgccaaggcgctggctgaggaggccgccaagaag
gggaggaccacctaccaggaggcccaagacattctgggaaatctgagagactttgacaag
cgggtgaatgacaacaagacggcagctgaggacgccatgaagagaatcccagagatcaac
gctaccatcatcgcggccaatgagaagaccaagcaggctgagggggcactaggcaacgca
gctgcagatgccaaggaggccaagagcaaggcagaggaggcagaaaagatagccagcgct
gtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacactatg
atgctggatggggaggtgaacggcatgatggaccagctgagtgcagccgaggcagagctg
gccaagaagaaagctgaggccgaccaggacatgatgatggctagcatggcatcggacaat
gcgaaggaagcggaggacaacgcccgcaaagccaagagtgctgtcaggaccgttctcaac
accatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaagttg
ggcttgattgaggggtcactgaagcaggccaaggacaaaatggcgaacagcgacctggac
cgcaagctggcggagctgaatgatgtggccaagagccaggaggagatgatcaccgactac
gacaggcagatcagggagatccggtctgacatcgccaacctcaacgacatcaagaacact
ttacctgacggctgcttcaacaccccatccctagagcgaccttaa
DBGET
integrated database retrieval system
