Oncorhynchus tshawytscha (Chinook salmon): 112233051
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Entry
112233051 CDS
T05605
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112233051
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112233051
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112233051
NCBI-ProteinID:
XP_024256196
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Position
LG16:complement(52784491..52847847)
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AA seq
522 aa
AA seq
DB search
MLPTVLHQNCRMQSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFING
RPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQ
VATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARFG
KKDDEEDCDKKDEDGEKKTKHSIDGILGDKGSRMDEGSDVESEPDLPLKRKQRRSRTTFT
AEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN
HLLPGGFPGSGMPTLPTYQLQDSGYPTTTLSQDVSGTVHRPQPLPPSTMHQGGLSGGDGG
SAYGLSSNRHGFSSYSDSFMSPSAPSNHMNPVSNGLSPQVMSILSNPSGVPSQSQHDFSI
SPLHGSLESSNSISASCSQRSSDQSIKTVDSMASSQSYCPPTYSTTSYSVDPVTAGYQYS
QYGQTAVDYLAKNVSLSSQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgctccccaccgtgctacatcagaactgtagaatgcagtcgtctttgccaggaacagta
ccgcgaatgatgcgaccagcgcctggacaaaactatccgcgcactggcttccctttggaa
gtgtcaactcccctgggtcaaggtcgggtaaaccaactcggtggagtgttcatcaacgga
agaccactgccaaatcatatccgacacaagatagtggagatggcccaccacggtatccgt
ccctgcgtgatctctcgacagctacgagtttcccatggttgcgtgtccaaaattctttgt
cggtatcaagaaacaggatcaatccgaccaggggcaataggaggaagcaaacccagacag
gtagcaacgcccgatgtggagaaacggattgaggagtacaagcgcgagaatcccggcatg
ttcagctgggagatccgagacaagctgctgaaggacggggtgtgtgacagaagcacagtt
ccttcaggtgaggcctcatctgtgagttccattagtcgtgttctgagagctcgatttggg
aagaaagatgatgaagaagattgtgataaaaaagatgaagacggagagaagaaaactaaa
cacagcatcgatggcatccttggcgataaaggtagccgtatggacgaaggctcagatgtg
gagtcggagccggaccttcccctgaagaggaaacagaggcgcagtcgcaccactttcacg
gccgaacagctggaggagctggagaaggcctttgagaggacacactatccagacatctac
accagagaagagctggcccagaggaccaagctcacagaggcccgtgtacaggtgtggttc
agcaaccgacgggccaggtggcgtaagcaagcgggagccaatcagctggcggcgttcaat
cacctgttgccaggcggattcccaggcagcggcatgcccacgctacccacctaccagctc
caagattccggttaccccacaaccacactatcacaagacgttagtggcacggttcaccgc
cctcagccattaccaccgtccaccatgcaccagggagggctgtcgggcggggatggtggc
tcggcctacggcctgtcgtccaaccgacatggcttctccagctactccgactccttcatg
agcccctcggcacccagtaaccacatgaaccccgtcagcaacggcctctccccacaggtg
atgagcatcctgagtaaccccagcggcgtgccctcacagtcccagcatgacttctccatc
tcgcccctccacggcagcctggagtcgtccaactccatctcggccagctgcagccagcgc
tcctcagaccagtccatcaagacggtggacagcatggcctcctcccagtcctactgccct
cccacctacagcaccaccagctacagtgtggaccctgttacggccggctaccagtacagc
caatatggacagactgctgtggactacctggcgaagaacgtgagcctgtccagccagcgg
aggatgaagctgggagaccactcagccgtcctgggactactccaggtggagacgggacag
gcctactag
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