Oncorhynchus tshawytscha (Chinook salmon): 112252077
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Entry
112252077 CDS
T05605
Name
(RefSeq) ELAV-like protein 1 isoform X1
KO
K13088
ELAV-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252077
03041 Spliceosome [BR:
otw03041
]
112252077
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112252077
mRNA cycle factors
Stress granule specific factors
112252077
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
General mRNP proteins
112252077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
Motif
Other DBs
NCBI-GeneID:
112252077
NCBI-ProteinID:
XP_024278766
LinkDB
All DBs
Position
LG06:14684853..14691890
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AA seq
374 aa
AA seq
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MAVRRGHIRYLKVCEVQSCQGDNRESQQHVSKGSINMKQDAYDNGYDEHMEDEPKDAKTN
LIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYHKNQSHSLGYGFVNYVNASD
AERAINTLNGLRLQSKTIKVSFARPSSDGIKDANLYISGLPKTMTQKDVEDMFTRYGRII
NSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAASPNQAKNS
QLINQLYHNQGRRFGGPVHHQAQRFRFSPMSVDHMSGMSTVSAQGNSTAGWCIFIYNLGQ
DADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRIGDK
VLQVSFKTSKGGHK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagaaggggacacatcagatacctcaaagtgtgtgaggtacagagttgtcag
ggtgacaatagggaatcacaacagcatgtcagtaagggttcgattaacatgaagcaagac
gcttatgataacggttacgacgaacacatggaagatgagcccaaagatgccaaaaccaac
cttattgtcaattacctgccccagaacatgagtcaggacgagttgcggagtctcttcagc
agcatcggcgaggtggagtctgccaaactcatccgcgataaagtggcaggtaatccctat
cacaaaaaccagagccacagtttagggtacggatttgttaactatgttaacgctagtgat
gcagaaagggctatcaataccctcaatgggctgagactacagtctaaaactatcaaggtg
tcctttgccaggccgagctctgacggtattaaggatgccaatctttacattagtgggctg
cccaagaccatgacacagaaagacgtggaggatatgttcacacgctatggccgcatcatc
aactcgcgtgtattggtcgatcaggcctctggcctgtccaggggtgtggcttttatccgc
tttgacaaacgggccgaggcggaggacgccatcaaagacctgaatgggcagaaaccccct
ggtgcctcggagcccatcacagtgaaatttgctgccagccccaaccaggccaagaactcc
cagctcatcaaccagctctaccacaaccagggccggcgctttggaggtccagtacaccac
caggcccagcgattcaggttctctccaatgagtgtggaccacatgagtggcatgtctacg
gttagcgctcaggggaattccacagctggctggtgtatcttcatctacaacctgggccag
gacgctgacgagggcatcctgtggcagatgttcgggccgtttggagccgtcaccaatgtc
aaggtcatccgagacttcaacaccaacaagtgcaaaggctttggcttcgtcaccatgacc
aactacgaggaggccgccatggccatcgccagcctcaacggttaccgcattggagacaag
gtcctgcaggtttccttcaaaaccagcaaggggggtcacaagtaa
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