Oncorhynchus tshawytscha (Chinook salmon): 112252708
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Entry
112252708 CDS
T05605
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112252708
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112252708
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
DUF6173
Motif
Other DBs
NCBI-GeneID:
112252708
NCBI-ProteinID:
XP_024279958
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Position
LG06:52249447..52316447
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AA seq
548 aa
AA seq
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MLEHSSELALVQSIYVNGMRCPPSASAAGVPVRNEDLGSLSNGSNSSRMNGSMENLDTPD
HDSIKMFVGQIPRSWTETELKELFEPYGAVHQINILRDRTATPPQSKGCCFVTFYTRKAA
LEAQNALHNIKTLTGMHHPIQMKPADSEKTNAVEDRKLFIGMVTKKYGENEVRMMFSAFG
QIEECRILRGPDGLSRGCAFITFSTRAQAANAIKTMHHSQTMEGCSSPMVCKFADTQRDK
EQRRLQQQMAQQMQQLNSASTWGNLAGLGGLTPQYLALLQQATSTGNQSNFGGMQRLGGV
NQLQLQNLATLAAAASAAQNSGGGSNALSANGALGNLYNSAAGQTAGSSAGAAMNTLASL
GLTQGLGGGLTGTSMGLNNLNALTGGVSGEYSNRMATMNGGLGASMANGSGASSMDALTQ
AYSGMQQYTASALPSLYSQSLLQGAAGGSQKEAGSQREGPEGANLFIYHLPQEFGDQDVL
QMFMPFGSVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKR
SKNDSKPY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacactcgtcggagctagccctggtgcagagcatatacgtcaacggcatgcgc
tgtcccccctctgcctccgccgccggtgtccccgtcaggaatgaggacctaggatctctg
agcaacggcagcaacagcagcaggatgaatggttctatggagaacctggatacccctgac
catgactccatcaagatgttcgttggccagatcccccgctcctggacggaaaccgagctc
aaggagctgtttgagccctacggggccgtgcaccagatcaacatcctccgagatcgcact
gccacacccccccaaagcaaaggatgctgttttgtaacgttttataccaggaaagccgcc
ctggaggcccagaatgcattgcacaacataaagaccttaacagggatgcatcatcccatc
cagatgaaacccgctgacagtgagaaaacaaacgcggtggaagaccgaaagctcttcatt
ggaatggtgacaaagaaatacggcgagaacgaggtccgaatgatgttctctgcttttgga
cagatagaggaatgccgaattctcagagggcctgacggtctgagcagaggctgtgcgttt
atcacattttctaccagggctcaggccgcgaatgcaatcaaaaccatgcatcactctcag
actatggagggctgctcctctcccatggtgtgtaagtttgcggacactcagagggacaaa
gagcagcggcgcctgcagcagcagatggcccaacagatgcagcagctcaacagcgcctcc
acctgggggaacctggcagggctgggaggcctcaccccacagtacttggcattgctccaa
caggcgacatctaccggtaaccagagtaattttggtggcatgcagaggctaggaggtgtg
aaccagctgcagctgcagaacctggccacgttagctgctgctgcctctgcagcccagaac
tcaggcggcggctccaacgccctgtcagccaacggagctctaggtaatctctataactca
gcagcaggccagacggcaggctccagcgctggtgcagccatgaacaccctggcctctctg
ggcctgacccagggcctcggtgggggcctgacggggacctccatgggtctcaacaacctc
aacgccctcactgggggtgtcagcggtgagtactccaaccgaatggcgactatgaacgga
ggactgggggcctcgatggcgaacggctcgggggcgagttccatggacgcactgactcag
gcctactcagggatgcagcagtacacggcctccgccctgccttccctctacagccagtcc
ctactgcagggagcagccggcgggagccagaaggaggctgggagccagagggagggtcct
gagggagccaacctgttcatttaccacctgccccaggagtttggagaccaggatgtcctg
cagatgttcatgccttttggaagtgtcgtctctgccaaagtcttcatcgacaaacagacc
aatctgagcaagtgcttcgggtttgtcagctacgacaatccggtgtcggcacaggccgcc
atccaggccatgaacggcttccagatcggcatgaagaggctcaaggtgcagctgaagcgc
tctaagaacgacagcaaaccctactga
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