Oncorhynchus tshawytscha (Chinook salmon): 112254796
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Entry
112254796 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112254796
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112254796
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GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
CCDC47
Motif
Other DBs
NCBI-GeneID:
112254796
NCBI-ProteinID:
XP_024283426
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All DBs
Position
LG07:complement(52172234..52189052)
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AA seq
1262 aa
AA seq
DB search
MDDLFSPRSLISRSLNSTQGEIRVGSSHQAKLPELQPRPVFGVQTQTENEELVWMPGVND
CDLLMYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNMLHASRYDAAKALQRLV
KKPVPKLIEKCWSEDDVKRFIKGLRQYGKNFFRIRKELLPNKKTGELITFYYHWKKTPEA
TGTRPYRQHRRQPSSRKAKTRATAATVNTPSQSQSMDISSASEDDLDSEDSEQGTCGHCA
TTTSKDWQHGGRDNILLCTTCRTYYNKHGRLPPGPKPADPPFMFKPVKEEEEGNGKHGMR
TRRSRTPLSSLRSGHKRLTGSPTSEDQQSSSHPSPAPSGASSTSNASRTSCLEKTDNTKK
PGKKIKEEAPLPKSTKRSRESAAQDPEEPERTPTKRTKILQVRQSGEQAECRSEGDGEAE
AERGEVEEESCSDSRSAQDDGSSDTKDIDQDNRSSSPSIPSPRQGNESDSDSSAQQLQGA
HQAAAETVSAPAAALAETQTPQIVPPPRVAGSNTSLPPQGTSPSAEPGQVQAQATLSPEP
PQPSATSAQAGQSVSYQTSPPHNRPLPPSHPLAGHSPVPPPLGQAFHPPTPVFQGPLPSP
GSLPPTQPLSLHGAPTQCPYPQRPPPHFPREPSFPQALPLTSGPQIKPPPTTPIPPSHKQ
PPHLSSSLAPPFPQMPSNLPPPPALKPLNSLPNQHPPGAPPPPPAHAPIPAHAAGSPTPA
SRAHAAAEPPWQRQPLPPPLLPALLLCPSALHPVLSASSPSTMGPVPSLQLSFPSLRPSP
ENPIGIGGSHVQIKEEPLDECEELESPPPPPRSPSPEPLVVNIASHASQSARFFKHLDRG
YNSCSRTDLFFTPLASSKLAKKREEAVERSKREAEHNAREREKDRERERERERQEDKNAR
ASSSSHDSRMSDVQMSGQVHMRSSFEQPPTSVAAVPPYIGPDTPALRTLSEYARPHVMSP
NNRNHPFFVSLSPGDPLLAYHMPGLYAAEPSLRERELRNLRERELRERMKPGFEVKPPEM
ETMHPSANPMEHFARHGALALPHIAGPPHHPFGHFHPVMQNHLERERQALALAGPQMRPE
LSYAERLTAERLHAERMASVANDPAARLQMLNVTPHHHQHSHIHSHLHLHQQDPLNQGEG
NGPHPLDPLAPGPRLARFPFPGGPIPNPLLNDLPHDHDMLRHPLFAYAAVAGAGYPRELQ
GPIPQMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHLQHGGPLPGQEDYYSRLKKEGDK
PS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgttcagtccgagaagccttatttccaggagcctgaacagcacgcagggg
gagatcagagtgggatcaagtcatcaggctaagctccctgagctgcaaccacgccctgtg
tttggtgttcagactcagacagagaatgaagagctggtgtggatgccaggggtcaatgat
tgtgacctcctcatgtacctcagagctgccaggagcatggcagcgtttgcagggatgtgt
gacggaggatccacagaggacgggtgtttggcggcctctcgtgacgacaccacactcaac
gctttaaacatgttacacgccagccgttacgacgcagctaaagctctccagcgcctagtg
aagaaacctgtgcccaaactcattgagaaatgttggtcagaagatgatgtgaagcggttc
atcaaaggtttgagacagtacggcaagaatttcttcaggattcgcaaagagctgctgccc
aacaagaaaacgggggagttgatcacattctactatcactggaagaagacgcctgaggct
acaggcacgcggccgtaccgtcagcaccgtagacagccgtcctcacgcaaggccaagact
cgcgccaccgctgccactgtgaacaccccttcccagtcccaatccatggacataagttca
gccagtgaggatgacctggacagtgaagacagcgagcaaggcacctgtggacactgtgcc
acaaccacctctaaggactggcagcacggaggccgggataacatcctcctgtgtaccacc
tgtcgtacctactacaacaaacatggccgcctgccgcctggccctaagcctgctgaccct
cccttcatgttcaaacctgtcaaagaggaagaggagggcaacgggaagcacggcatgagg
acgcgacgcagcagaacaccgttgtcttcattaagaagtggccacaagaggctgaccggc
tctcctaccagtgaagaccagcagtccagtagccatccctctcccgcccccagtggagct
agctccacctccaacgcatccagaacctcctgtttagagaagactgataacacaaagaag
cctggcaagaagataaaggaagaggcgcccctaccaaagagtactaaacgttccagggag
agtgcagcccaggacccagaggagcctgagagaacaccaactaaaaggacgaagatactg
caggtcagacagagtggtgaacaggcagagtgccggtcggagggcgatggagaggctgag
gcagagaggggtgaggtggaggaggagagctgctcagacagccgcagtgcccaggacgac
ggcagcagcgacaccaaagacattgaccaggacaaccgctcctcctcccccagcatcccc
agccctcgccagggcaacgagagtgactctgactcctctgcccagcagctccaaggtgcc
caccaggctgcagcagagaccgtcagtgcccctgctgctgcccttgctgaaacacagacc
ccacagattgttcctccaccacgggttgcaggctcaaacacatccctgcctccccagggt
acctctccctctgcagagcctggccaggtacaggcccaggcaaccctctccccagagcct
ccccagccttcagccacctctgctcaggctggtcagtcagttagctaccagacaagtccc
ccacacaaccgacccctacctccctctcaccctctcgctggccactcacctgtccctcct
ccgctgggacaggccttccatcctccaactcctgtattccagggtcctcttccttctcct
ggctctctgcctcccacccagcccctgtccctccatggtgctccgacccagtgcccctac
ccccagcgaccccctcctcactttcccagggaaccttccttcccccaggccctccccctc
acctccgggccccaaatcaaaccacccccaaccacacccatccctccatctcacaagcag
ccaccacacctctcttcttcccttgctccccctttcccgcagatgccgtccaacctgccc
cctcctccggcactgaagcccctcaactccctgcccaaccagcaccctcccggtgcccct
ccaccccctccagctcatgccccaatccctgcccatgcagcagggagtcccaccccagcc
tcccgtgctcacgcagctgcagaacctccctggcagaggcagccactcccacccccactc
ctccctgccctcctgctctgcccctcagccttgcaccctgtcctctctgcctcttctccc
tctaccatgggtccagtccctagtctccagctctccttcccctccctacgcccctcgccc
gaaaaccccattggcattggagggtcacatgtccagattaaagaggagccattggatgaa
tgtgaggagcttgagagtccgccccctccacccagaagtccctcaccggaacctttggtt
gtcaacatcgccagtcatgccagccaatcagcacgatttttcaaacacctggaccgtggc
tacaactcgtgctccagaacagacctgttcttcactcccctggcctcatccaagctggcc
aagaagagagaggaggctgtggagagatccaagagagaggctgagcacaatgcccgagaa
agggagaaggacagagagagggagagggaacgagagaggcaggaagacaaaaatgctaga
gcttccagctcgtcccacgacagccgtatgagtgatgtccaaatgtccggccaggtccac
atgcgctcctccttcgagcagcctcccaccagtgtggccgctgtgcccccttacatcggc
cccgacacccctgccctgcgcaccctcagtgagtacgcccgaccccacgtcatgtccccc
aacaatcgcaaccaccccttcttcgtgtccctgtcccccggggaccctctgctggcatac
cacatgcccggcctgtatgccgccgagcccagcctgagagagagggagctccgtaacctc
cgggagagggagctccgcgagaggatgaagcctggctttgaggtcaagcccccagagatg
gagaccatgcatccatcagccaaccccatggagcactttgccagacatggagccctggcc
ctgccgcatatcgctgggccgccccaccacccctttggccacttccacccggtcatgcag
aaccacctggagagggagaggcaggcactggccctggccgggccccaaatgcgtccagag
ctaagctacgctgagcgactgactgctgagaggctccatgctgagaggatggcatctgtg
gctaacgacccagccgccaggctgcagatgctcaacgtcacaccgcatcaccaccagcac
tcccacatccactcacacctgcacctacatcagcaggacccactcaaccaaggtgagggt
aatgggccccaccctctggatcccctggctcctgggccccgtctggcccgcttccccttc
cctggaggccccatccccaaccctctgctcaacgacctgccccacgaccatgacatgtta
cgacacccactgtttgcctatgccgctgttgcaggagcagggtacccccgtgagctccag
gggcccatcccccagatgtctgcagcccaccagctccaggccatgcacgcccagtcagca
gagttgcagaggctggccatggagcagcagtggctacacggacaccaccacctacaacac
ggggggcctctgcccggacaggaggattactacagccgtctgaagaaagaaggtgacaag
ccatcgtga
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