Oncorhynchus tshawytscha (Chinook salmon): 112257978
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Entry
112257978 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 28 isoform X1
KO
K21122
ubiquitin carboxyl-terminal hydrolase 28 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112257978
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257978
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112257978
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112257978
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112257978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
112257978
NCBI-ProteinID:
XP_024287726
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All DBs
Position
LG09:complement(40137478..40177146)
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AA seq
1188 aa
AA seq
DB search
MRVEQQREHGENNEFGQPGGHQPCCWTADHTASRGGPGTAETADTEANRETQKRAPPKDD
HQTAIELSLQESQAEEIELNRALEDRAARVKRKCYEAQGESCSPADWIRQDGWPVGIHNM
GNTCWFSAVIQSLFHLPVFRRLVLNYCLSERILEKCKSHSDKRNIAFMQELRCLFALMVG
STRRFVDPSAAVELLREAFRSSEAQQDVSEFTHKLLDWLEDAFQLAANGNSLEDKKENPM
VQLFYGTFVAERTHEGKTLSNIEQFGQYPLQVNGFNNLEECLEGAMVEGEIEALHPDQTI
SSGSKRWFSKLPPVLTFELSRFEFNQSLGRPEKIHKKLEFQEMIYMDRYLHKNNEQTHNR
RGEVKRLKEHLTVLQQKLECYRSYGSGPTNYPLADMLQYMLEFACTKPTSVSPAEDPRLA
ASSPTPPSSNPQHTDANPDDTSQCHEPGDAGPFDSSTCQQKHSSSQRMPIYKPFTQCRPP
MDAPPHPAPHSVTEEELRFVKTCLQRWRTEMENNMDELKASIDRVSQALEGMYSDNRLCQ
VPYRLHAVLVHEGQALAGHYWAYIYDHSNQCWMKYNDVIVSESSWEELVRDSYGGMTNAS
AYCLMYIDDRLPHLIAEDTDDETGQVMQGMDSLPPILGRYVRQDNHWFQQELREWEEQLY
QPPQQEPAAPTAASTSTRVPSKKKDESAEPVPQPGPAQEPTGEQGQEPEAELAVKLAVES
EKLVPTSQPQSPVPVSPVPVSLENAGSSPEESDHQTVTPEPCQHTSEDKEGQQHSQVGRL
PPPQSPSPAAEMNGQAQTAAVTHDPSTEFTTETDSETGVREAGAEAAAAPDTQADSEDGQ
DALPAPCRQQQQPENVVVEIPNVGRIPVQADNDGYNEEMMLTPAMQGIIMAIAKARQAFD
NEGPEAGLIKAFQEEYSRLFELSQEETTAQQDPRLHHALVYFFQNKAPNRVIERTLLEGF
TDRNLSFDDRSISIMREARAKLRLIKPEDMDMEEYMQWHDDYSLFRTVFVYLLTGLEQYQ
HGKVSEALNYLNHAYKDNTMLLRRGEKRGVDQSLIALYRRRCLKELNDNAATLFRSSEVS
GVEEGMIIMNEAVIPCMHLMSRPDMISQEDLDTMEAIRSHWCSYLEVDLDDSLQLKLGEF
LPRVLDCSTERVVLKDPPTVRSKVPHDLCSRLAAIMESITNTSVVAVK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagagttgaacaacagcgtgaacatggggaaaacaacgaattcggtcagccaggggga
catcagccatgctgttggactgctgaccacacagcctccagaggagggccagggaccgca
gagaccgcagacacagaagccaacagggagactcagaaaagggctccacctaaagatgac
catcagacagccatcgagctcagcttgcaagaatcccaggcagaggagatagagctcaac
agggcactggaggacagggctgcacgagtgaagaggaagtgctacgaggcccagggagag
agctgcagccctgcagactggatccgccaggatgggtggcctgtgggcatccacaacatg
ggcaacacctgctggttcagtgctgtcatacagtccctgttccacctgcccgtgttccgc
agattggtactcaactactgcctgtctgagcgaatcctggagaagtgtaagagccactcg
gacaagaggaacatagccttcatgcaggagctgcgctgtctctttgctctcatggtgggc
tccactcgcaggtttgtggacccgtctgctgccgtcgagcttttgagagaggctttcaga
tccagtgaggcccaacaggatgtgagtgagttcacccacaaactccttgactggcttgaa
gatgcctttcagctggctgccaatggaaacagcctggaagataaaaaagaaaatccaatg
gttcagcttttctatgggacgtttgtggcagagagaacacatgagggcaagaccttatcc
aacatcgagcagtttggccagtaccccttacaagtgaacggtttcaacaacttggaggaa
tgtctggaaggtgccatggtagagggggagattgaagccctccatccggatcaaaccatt
tcatctggcagcaagagatggttctcaaagttaccaccagtgttgacctttgaactgtcc
aggtttgagttcaaccagtcgttaggacgcccagagaagattcacaagaaactggagttc
caagaaatgatttatatggacagataccttcacaagaacaatgagcagacccacaacagg
agaggagaggtgaagcgactgaaggagcatcttacggtcctgcagcagaaactggaatgc
tacagaagctatggctccgggccgacaaattatcccctggcagacatgttacagtacatg
ttggagttcgcctgcactaagcccaccagtgtgtcccctgctgaagacccgaggctggct
gcctcttcccccactccccccagcagcaacccccagcacacagacgccaaccctgacgat
accagtcagtgtcatgagccaggagacgcaggcccgttcgacagctccacctgtcagcag
aagcactcctcgagccagaggatgcccatctacaagcccttcacccagtgcagacccccc
atggacgccccacctcatcccgccccccacagtgtgacggaggaggaactgcgcttcgtc
aagacctgcctgcagcgctggaggacagagatggagaacaacatggacgagctaaaggcc
agcatcgacagggtcagccaagcgctggagggcatgtactcggataaccgtctgtgtcag
gttccgtacaggcttcacgctgtccttgtccacgagggccaagccttggccggccactac
tgggcctatatctacgaccacagcaaccagtgctggatgaagtacaacgacgtcatcgtc
agcgagtcctcctgggaggagctggtcagggactcgtacggaggcatgaccaacgccagc
gcctattgtctcatgtatatcgacgacaggctgcctcacctaattgcagaagacacagat
gacgagacgggccaggtcatgcagggcatggactctctgccacccatcctcgggcgctac
gtgcgccaggacaaccactggttccagcaagagctcagggagtgggaagagcagttatac
cagccgccacagcaggagccggccgctcccactgcagcctccacctccactcgtgttccc
agtaaaaaaaaagacgagtcagcagaaccagtcccccaacctggacctgcccaggaaccc
actggggagcagggacaggaaccagaggcagagttggctgttaaactggcagtggaatct
gaaaagcttgtcccaacaagccagccccagtccccagtacctgtgtccccagtacctgtg
tccctggagaacgctggcagcagcccagaggagagcgaccaccagactgtcacgccagag
ccctgccaacataccagcgaggacaaggaggggcagcaacacagtcaagtgggcaggctc
cccccaccacagtctcccagccctgcagcagagatgaatggccaggcccagactgcagct
gtgacccatgacccctccacagagttcaccactgagaccgacagcgagactggagtcaga
gaggcaggggcggaagctgcggcagcgcccgacacccaggcagacagcgaggatggtcag
gacgccctgccggcgccttgtcgccagcagcagcaaccagagaatgtggtggtggagatc
cccaacgtgggcaggatcccggtgcaggctgacaatgatggctacaatgaggagatgatg
ctcactccagctatgcagggaatcattatggccatagccaaagccagacaggcattcgac
aatgaaggccctgaggctggcctcatcaaggcgttccaggaggagtactcccgtctgttt
gagttgtcccaggaggagaccactgcccagcaggacccacgcctgcaccacgccctggtc
tacttcttccagaacaaggcgcccaatcgcgtcatcgagaggaccctgctggagggcttc
accgaccgcaacctcagcttcgacgacaggtccatcagtatcatgagagaggcccgcgcc
aaactacgcctcatcaagccagaggatatggatatggaggaatatatgcaatggcatgac
gactacagcctgttccggacagtgtttgtctacctgctgacgggcttggaacagtaccag
catggaaaggtgagcgaggcgctgaattacctcaaccacgcctacaaagacaacaccatg
ctactgagaagaggggagaagagaggggtggaccagtcacttattgcactttacaggagg
agatgtctcaaagaattgaatgacaatgcggccaccctgttcaggagcagcgaggtgagc
ggcgtggaggagggcatgatcatcatgaacgaggcggttatcccctgcatgcacctgatg
agccggccggacatgatcagccaggaggacctggacacaatggaggctatccgcagccac
tggtgctcctacctggaagtggacctggatgactccctacagttaaagctgggtgagttt
ctgcccagggttctggactgctcaacagagagggtggtcttaaaagatccaccaacggtg
cgctccaaagtgccccacgacttgtgcagccgcctggccgccatcatggagtctatcacc
aacacctccgtggtcgctgtcaaataa
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integrated database retrieval system
