Oncorhynchus tshawytscha (Chinook salmon): 121839296
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Entry
121839296 CDS
T05605
Name
(RefSeq) protein CASP-like isoform X1
KO
K09313
homeobox protein cut-like
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
121839296
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
121839296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
DegS
Get5_bdg
PA28_alpha
Motif
Other DBs
NCBI-GeneID:
121839296
NCBI-ProteinID:
XP_042153631
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All DBs
Position
LG14:55836515..55995476
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AA seq
640 aa
AA seq
DB search
MAANAGSMFQYWKRFDLQQLQRELDATATQLANRQDESEQSRKKLIDQSRDFKKNTPEDV
RKQVAPLLKSFQGEIDALSKRSKEAEGSFLNIYKTLIDVPDPFPVLELGQQLQLKLQRMH
DIETENLKLRETLEDYNKEFTEVKNQGVTIKALKEKIRDYEQSLKNQAENLVQKKQVQLH
NDYAEKERKLQESQDSMSSKLVEADHKAQALQTALETTQAELFDLKTKYDEDCTAKADEI
EMVMTDLERANQRAEAAQREADTLREQLTSSNQSLQLTTQIQTTPEMDQAVEALSRSSLE
AELGAKDREMVQLVEDVQRLQASLSKLRESSSTQITQLQLQLSTKTASLKQLEGKLQEQA
DYEEVKKELRSITALWKLPVALMFRPSILKSMEFGPSDSSVQVMSKPLEVLLLEKNHSLQ
SESSSLRIANTELSGRYADLQLEFSSAVRTSAEQRALILKLEHDLSSIQTMSSMLRPDAD
GADLTSMIDTIPEPIKEATAMFAGLGMAPQGELPQGQMDSLLSFISSQRERFHSHNQELE
AESRSMQVTMQALQSELDSLHADNINLYEKIKFLQSYPGRAGGSDDTVTVRYSSQYEERL
DPFASFSKKVLYETAWSESIGRDCSAFCAKKYSDHLHRFH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcaatgtttcaatattggaagcgctttgatttacaacaactg
cagagagaactagacgccaccgccacacagctcgccaacagacaggatgagagcgaacag
tccaggaagaaactcatcgaccagagccgcgacttcaagaagaacacgccggaggatgtc
agaaagcaagtggctcctctgctcaagagcttccagggagagatcgatgccttgagcaaa
agaagtaaagaagcagaaggttccttcttgaacatctacaagacattaatagatgtccca
gaccccttccctgtactggagttgggtcagcagttacagctgaagctccagcggatgcac
gacatcgagacagagaacctcaaactcagagagactctagaggactacaacaaagagttt
actgaggtcaagaaccagggggtgactattaaagccctgaaggagaagatccgggactat
gagcagtccctgaagaaccaggctgagaacctggtccagaagaaacaggtccagctccac
aatgactatgcagagaaggagagaaagctccaggagagccaggactccatgtcctctaag
ctggttgaggctgaccacaaggcccaggccttacagacagctcttgaaacaactcaggca
gagctctttgatctgaagaccaagtatgacgaggactgcacagcaaaggccgatgagatt
gaaatggtgatgaccgatctagagagagccaatcagagggcggaggcagcacagagggag
gcggacactctgagggagcagctgacctcttctaaccaatccctgcagctgaccacacag
atccaaaccaccccagaaatggaccaggcggtggaggccctgtcccgctccagtctggag
gcagagctgggggccaaggacagggagatggttcagctggtggaagatgttcagagactg
caggccagcctgtctaaactcagagagagttccagcacacagatcacacagctgcaacta
cagctcagcaccaagacggccagcctcaagcagctggagggaaagctgcaggaacaggct
gactatgaggaggtgaagaaagagctgagatcgatcacagctttgtggaagttacctgtg
gcgctgatgtttaggccaagcatcctcaagtctatggagtttggcccatcagacagctca
gtgcaggtcatgtctaaacccctagaagtgttattgttggagaagaaccatagtctgcag
tctgagagttcctctttgcgcatcgcaaacactgagctgagcggacgctacgcagacctg
cagctggagttctcgtctgcggtccggaccagcgccgagcagagagcgctcatcctcaaa
ctggaacacgacctgagcagcatccagaccatgtcctccatgttacgccctgatgctgac
ggggctgacctgacgagcatgattgacaccatccctgagccaatcaaagaggccactgcc
atgttcgcaggcctaggcatggccccccagggggagctgcctcaaggccagatggactct
cttctctccttcatttccagccagagagagaggttccactcacacaaccaggagctggag
gctgagagtcgttccatgcaggtgaccatgcaggccctgcagagtgagttggacagcctg
catgccgacaacatcaacctctacgagaagatcaagttcctccagagctaccctggcagg
gctggaggcagtgatgacacggttacggtgcgttactcctcccagtatgaggagagactg
gaccccttcgcctccttcagcaagaaggtgctctatgagactgcctggagtgagagcatc
ggtcgagactgctctgccttctgtgctaagaagtactcggatcacctgcatcgttttcat
tag
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integrated database retrieval system
