Oxalobacter vibrioformis: NB640_12030
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Entry
NB640_12030 CDS
T08675
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NB640_12030 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_12030 (recC)
Enzymes [BR:
ovb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NB640_12030 (recC)
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NB640_12030 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WAW09932
UniProt:
A0A9E9LWF0
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All DBs
Position
complement(2427856..2431230)
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AA seq
1124 aa
AA seq
DB search
MPLFSHRMMNVTMSHRLDTLAARLAARLGASMASPFAAEEVIVPSAAMRRHLSLALADTS
GICANVRFSYLAQWFWETIRKVLPVAAESPYAADVLSWRIFHILEDGDFVASHPRLANWL
KRNDQAGRFELAATLASLFEAYLTYRPDWLYAWFEGKTLTLPRPAKKGGKVEEADAAWQA
ALWRRIEAQTGSDGVHPGVRFFEVLEAGREKAGFLPERLSVFCLPAIAPQYLQMLEKISE
WVEVDLYVLNPCREFWFDVVPEKRLAVMKKTGQETYHETGNALLAAWGKQTQSHLSLLMD
LGHDWDFLPDTGNPAVSLLGRLQEAVLALEEPALEAIAPDDRSVEVHVCHSLMREVEVLH
DQLLALFASDDPPAPGDILVVTPDVDTAAPLVDAVFGNAPSGARIPYRIMGRAANRINPV
ARAVMDIFALAASRFTAADVYDLLLQPLVAKRFGLQGAADQVYGWLEEAGICWGLDGEQK
RSLSLPMDDSRSFHDGFYRLFLAYALPADARMPFGTRLPAGNPEGTEAAQLGSLWHFIRC
LSRLSASLEKPEDAEGWREVFLAVLDDFICPDTAQLEDDLAVRQAAGRLFDSMGMNGRGL
AVDADVMRRALGQALDESARGAVPSGAVTITAMAGLRNLPYRIVCAIGMNDGAFPGDASP
LEFDLMARAPRAGDMQRRDDDRNIFLDLLLAARERFYISYTGKSVRDNTPVPPSVVVSEL
LDTIARALAKGHPGLPVPEAEKLVRESLVIEHPLQVFSRRYFEPDGDTRIRSHHADFCRA
LVKKAEAMAALSLAADTALIDDTDGDGKDAAWHRGAPFFSAPLPEPDAAWREVSLTGLAQ
FFANPSRFLLQNRMGVSFPANAGELPVNEPFVASRLDAWQLADRLLPLLLQGRSMDEVLA
AAQAGTEFPSGMLGQAGIIEELDALVGFVDRIRDALSPDCLPPFSVGLEFDIEGQPWTLE
GVFTELRENGLILYRYVDADGDSGTRFTLSAWITHLFLNAVAPEDVVCKTACHLMNASFS
FVPCDRDEARQLLKDLLGLYRTGLNEPLRFFPLSARAFIEGNGNIGAARRKWDSGNDRQR
SERDDVFYRLALRGQDDPLDDFFVDCARRVMEPMNRLMKRHDDA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttttcccaccgcatgatgaatgtgacgatgtcgcaccgccttgatacgctg
gcagcccggctggcggccaggctgggcgcatccatggcgtcgccttttgcggcagaggaa
gtcattgtccccagcgcggccatgcggcggcacctgtcgcttgcccttgccgacaccagc
ggtatctgcgccaatgtgcgcttttcctatctggcccagtggttctgggaaacgatccgc
aaagtgctcccggttgccgccgaatcgccttatgcggcggatgtgctcagctggcggatt
tttcatatcctggaagatggggactttgttgcttcccatccgcgcctggcaaactggctt
aagcgcaacgaccaggcggggcgcttcgagctggctgccacgctggcctcgctttttgaa
gcgtacctgacttaccgcccggactggctttatgcctggtttgagggaaagacgctcacc
ctcccccgcccggcaaaaaaaggcgggaaagtggaggaagcggatgctgcctggcaagcg
gcgctgtggcgcaggatcgaggcacaaaccggctcggacggtgtgcatccgggcgtgcgt
ttttttgaggtgctggaggctggcagggaaaaggcgggctttcttcctgaaaggctgtcg
gttttctgcctgccggcgattgccccacagtacctgcagatgctggagaaaatcagcgaa
tgggtggaggtggacctgtatgtcctgaacccgtgccgcgaattctggtttgatgtggtg
ccggaaaaacgactggctgtcatgaaaaaaaccgggcaggaaacgtatcatgaaacgggc
aatgcgctcttggcggcatggggaaagcaaacccaatcgcacctgtcgcttttgatggat
ctcgggcatgactgggattttctgcccgataccgggaatccggccgtttcgctgctgggc
cgcctgcaggaggcggtactggcgctggaagaaccggctcttgaagcgatcgccccggat
gaccggagcgtggaagtgcatgtgtgccactcgctgatgcgtgaggtggaggtgctccat
gaccaactgctggccctgtttgcttcggatgatcccccggcccccggcgatatcctggtg
gtcacgcccgatgtggacactgccgcgccgctggtggatgcggtttttggcaatgcgccg
tccggagcgcggattccctatcgcatcatgggacgcgccgcaaaccggatcaacccggtg
gcccgcgcggtaatggatatttttgcgctggcagcgtcgcgttttacggcggccgatgtg
tacgacctgctgttgcagccgctggtggcaaagcgctttggcctgcagggtgcggcagac
caggtgtacgggtggctggaggaagcgggtatctgctgggggctggatggggagcagaag
cgctcgctctccctgccgatggatgacagccgcagctttcatgacggcttttaccgactt
ttcctggcgtatgccctgcccgctgatgcccggatgcctttcggcacacggcttcccgcc
gggaacccggaaggaacggaagcggcgcagctggggagcctgtggcactttatccgatgc
ctttcccggctgtcagcctcgcttgaaaaaccggaagatgccgaaggctggcgggaggtg
tttctcgctgtgctggatgattttatctgcccggacacggcgcagctggaagacgatctg
gcagtgcggcaggcggcgggacggctttttgacagcatggggatgaatggcagggggctg
gcggtggatgcggatgtcatgcgccgtgcgctgggccaggcgctggatgaatccgcccgc
ggggcggtgccttccggcgcagtaacgattaccgccatggcggggctgagaaacctgccc
taccgcattgtctgcgccatcggcatgaatgacggcgcttttccgggtgacgcaagtccg
ctggaatttgacctgatggcgcgcgcaccgcgtgcgggggacatgcagcggcgtgacgat
gaccgcaatattttccttgacctgctgctggctgcccgtgaacgcttctatatcagctat
acgggaaaaagtgtgcgggataatacgccggttccaccctcggtggttgtctccgagctg
ctggatacgattgcccgcgccctcgcgaaaggccatccggggcttccggtaccggaagcg
gaaaaactggtgcgcgagtctctggtgattgaacacccccttcaggttttttcccgccgc
tatttcgagccggacggcgatacgcggataaggagccatcatgcggacttttgccgggcg
ctggtgaaaaaagccgaagcgatggctgcactttcgcttgcggctgacacggccctgata
gatgacacagacggggatgggaaggatgccgcctggcaccggggtgcgccctttttcagc
gcccccctgcccgagccggatgcggcatggcgggaagtgagcctcaccgggctggcacag
ttttttgcaaatccaagccgctttttgctgcaaaaccggatgggggtatcttttcctgcc
aatgcgggtgagctgcctgtcaatgagccttttgtcgcgagccgcctggatgcctggcag
ctggctgaccggctgctgccgctgctgcttcaagggcgcagcatggatgaggtgctggct
gccgcacaggccgggacggaatttccctccgggatgctgggacaggccgggattatcgaa
gagctggacgccctggtggggtttgtggacaggataagggatgcgctttcaccggattgt
ctcccgcctttctctgtcgggctggaatttgacatagaggggcagccctggacgctggaa
ggggtatttacggaactgcgggaaaacgggcttatcctgtaccgctatgtggatgctgac
ggcgacagcggcacgcgctttacgctgtcggcctggatcacgcatcttttcctgaatgcc
gtggcgccggaagacgtggtgtgcaaaacggcctgccacttaatgaatgcgtcgttttct
tttgttccctgcgacagggacgaagcccgccagctgctgaaagacctgctggggctttac
cgcacggggcttaatgagccgctgcgctttttccccttgtctgcccgcgcctttatcgag
ggcaacggcaatatcggcgctgcgcggcgcaagtgggacagcggcaatgaccggcagcgc
agcgaacgtgatgatgtgttttaccggctggccctgcgcgggcaggatgacccgctggat
gatttttttgtcgattgcgcgcgacgggtgatggaacccatgaaccgcctgatgaaaagg
catgacgatgcatag
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