Opisthorchis viverrini (Southeast Asian liver fluke): T265_00078
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Entry
T265_00078 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K06236
collagen type I alpha
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi04512
ECM-receptor interaction
ovi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
T265_00078
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
T265_00078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ovi00536
]
T265_00078
Glycosaminoglycan binding proteins [BR:
ovi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
T265_00078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
20314266
NCBI-ProteinID:
XP_009161999
UniProt:
A0A075ADI0
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MPRFDSEMSCRAAFKQWCLILPLFAFCLVLLSSVNTVNGQVSSPSEALGPRGPRGDPGPP
GPEGGMGPPGPRGPIGLPGTDGERGPPGPQGVPGTPGRDGRPGVPGVQGTPGPQGIAGSP
GEPGPEGSPGPQGYMGPQGEKGDDGFEGAKGSQGAMGAQGLQGPVGPIGPPGPMGPPGPA
GPRGETGPAGRVGPVGIQGSVGTPGTPGIPGSVGQKGERGEPGKKGAKGSRGTAGNPGKP
GQAGQPGIQGEPGHDGRPGVRGEPGERGSVGAVGVDGRPGERGLMGRLGAQGPKGAQGES
GVIGNVGPTGPIGIKGEKGQVGRPGGVGEPGPRGPRGLMGPVGVKGVRGELGPSGSPGSP
GLDGQPGTDGQPGEPGTPGEQGISGPPGPPGRPGLDGSPGPRGENGPPGLNGLPGLKGSS
GPMGPAGLPGVNGKPGTTGPSGPMGQVGPRGISGPVGADGEKGTAGLPGPQGFPGDVGDA
GEPGADGEDGPEGPAGAMGPPGPPGPAGEQGPPGTPGMAGPPGPTGYDGPPGPDGKDGEP
GKDGKPGEQGEPGEPGKTGPQGRPGQRGYLGPQGPRGVKGDTGIMGPPGVYGIIGATGFP
GESGRQGTEGEPGEKGYPGMPGNKGRRGLRGAQGIRGPPGISEVGQVINRTVVGSPGMVG
QRGATGPPGLSGAPGNKGPRGRKGVQGDRGDYGERGPPGPAGEPGADGEPGSDGENGPDG
ATGEAGPQGPPGPPGDLGTMGPQGPPGPPGPKGSVGLTGLRGEPGKRGPPGPPGLTGEFD
YAIDSEQLNFLKLLSDKATQQIILRCMKQEEQSLQGNETTSAPPQLVQLLADDDTLLSPS
ARKRRVSITQNTCGLSAEGATVAFVDSRPSLLPLRDIQLTIDTSTTISVELGEACFS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgccccgttttgactcggaaatgagttgccgcgcagctttcaagcagtggtgcctgatc
cttcctctatttgcattctgtctcgttttactcagttctgtcaatactgtaaatggtcaa
gtaagcagtcccagcgaagcattgggtccacggggtccccgcggtgatccagggccacca
ggtccagagggtggaatgggtccaccgggaccacgtggaccaatcggacttccaggaacg
gatggcgaaagaggcccgcctggtccacagggagtcccaggaactccaggaagagatggt
cgtccaggcgttccaggagtccaaggtacaccgggacctcaaggcattgctggatctccc
ggtgagcctggaccagagggaagccctggacctcaaggatatatgggaccccagggagaa
aaaggagatgatggctttgaaggtgcaaagggctctcaaggagcgatgggtgctcaaggt
ctccaagggcctgtggggcccatcggcccccctggccctatgggtcctcctggtccagca
ggtccacgcggagaaacaggccctgctggtcgagttgggccggtgggtatacagggtagc
gtcggaacgcccggtacaccaggaatacccggatccgttggacagaaaggcgaacggggt
gaacccggcaagaaaggtgcaaagggatcaagaggaactgctggtaatccggggaaacct
ggccaagctggacaacctggtatacagggggaacctggtcacgacggacgacctggggtt
cgaggtgaacctggagaacgcggctcagttggagcggtcggagtagatggccgtcccgga
gaaaggggattgatgggaagattgggtgcacaaggtccgaaaggtgctcagggtgaatcc
ggtgttatcggcaacgtcggtccaaccggtccaatcggtattaaaggagaaaaaggtcaa
gtgggtagacctggaggcgtaggagaacctggtcctcgagggccacgtggtctaatgggg
ccagttggtgtgaagggtgttagaggagaactcggtcccagtggaagccccggcagtccc
ggtttagatggtcaacccggcaccgatgggcaacccggagaaccaggtacaccaggagaa
caaggtatctccgggcctcccggccctccgggccgtccaggacttgacggcagtcctggg
ccacgaggtgaaaatggaccacctgggttgaatggcttacctgggctgaagggcagtagt
ggaccgatgggaccagcagggttaccaggtgtaaacggaaaacccgggacaacgggaccc
tccggaccgatggggcaagttggaccaagagggatcagtggtccggttggtgcagatggt
gagaagggaactgctggtttgcccggaccacaaggtttccctggcgatgtgggtgacgct
ggagaacccggtgctgatggagaagatggacctgaaggacctgctggtgcaatgggacct
ccaggacctccagggccagctggtgaacaagggccaccaggaactccaggaatggcaggt
ccacccggcccaactggttacgatggtccacctggtccagatgggaaagatggggaaccg
ggaaaggacggaaagccgggtgaacaaggagagcctggggagccgggaaagactgggcct
caaggacgtccgggacagcgtggatatcttggaccgcaggggccacggggtgtaaaaggc
gataccggaataatgggtccacctggagtatatggtataattggtgctaccggatttccc
ggagaatctggaaggcaggggacggaaggggaacccggagaaaagggatatccaggcatg
ccaggtaacaaaggaaggcgaggactgcgaggagctcaaggaatccgtggaccgcccggc
atttcagaagttgggcaggtgataaacaggactgtcgtaggaagtcctggtatggtgggt
cagcgtggagcaacgggacctcctggactaagtggtgcaccgggaaacaagggtccaaga
ggtagaaaaggcgttcaaggagaccgaggagattacggagaacgtggtccacccggacct
gctggtgagcctggtgctgatggagagccaggaagtgatggtgaaaacggacctgacgga
gcaactggagaggcaggtccacaaggtccaccaggtcccccaggtgatttggggacaatg
ggaccacaaggtccccctggaccaccaggaccgaaaggctcagtgggactgaccggacta
agaggggaacctggaaaaagaggaccgcccggaccacctggactaactggagaatttgat
tatgccattgattcagaacaactgaacttcttgaagctattgagcgacaaggccacacaa
caaataatcttgcgatgcatgaaacaggaggaacagtcattacaaggaaacgagacaacc
tcagctcctcctcaactggttcagttgctggcagacgacgatacgcttttgtctccttcc
gcgcgaaagcgcagagtttccataacacaaaacacctgtggattgagcgccgaaggagcg
accgtggccttcgtcgacagccgaccaagtcttctaccactgagggacattcagctgacg
atagacacgtcaaccacaatcagcgtggaactgggtgaagcttgcttttcctag
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