Opisthorchis viverrini (Southeast Asian liver fluke): T265_03848
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Entry
T265_03848 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_03848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_03848
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
T265_03848
mRNA degradation factors
3'-5' decay
Pan complex
T265_03848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
DUF6313
Motif
Other DBs
NCBI-GeneID:
20318035
NCBI-ProteinID:
XP_009166693
UniProt:
A0A075A1X8
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MFRGQQTRPGGISDYFMSQMGTINAGGLRPSVISGVTGNGSNCAPSVFPGQNGLFKMNER
FRVPPKSTDSESPFFGFQTPTPGQSASRVLSNLQDSNQMSFNNQLSSDLCSPFVSGRFGS
AGGDNFHSEDAIGHVNEGHAELSHLPTTTSSLDNILSIPPSYSSILPSPGKSNPQAAFQS
SAAANPNLNMPVVEASIELRPDGKVPNLGHSRPGLTTQYYTSQQFNSARDLQASGNLKAA
NWILVPPVPEGTAAHMRTGRVHELKSRACTDRVFNASYMDHELKQVLHNKVQACLFTSDE
ATREIAKRFVRTLRGPGKRREKRLRTSAWSESANMFQNDRHSVIDPQCDRSECVADMLLE
DIIRPDDFGCFEKLPRNLGAYTDLVPLEVMQQPRVSVTFGLPCVCFKAWSPRFGRPMLLR
RVILPVDHEAALSPDAYLLAKQLSELDHPAVVGFRDVFFTNAFNDNSAVVVYEYTPCSST
LQQTHMSDPMKLTSFSSPFNISRTVRPHSALKSGPSDLGMLPETTLWSYLVQLVHGIRFI
HQQVHRACGILDPTKVLIQDGTRLRINCFGLKDILFHQSQDPNLAEDQAGDFVQLGKLLV
GAACGTAEAIQTNQRVTSFNLLQRTYRPEMVTLLRGLISGQITGVDQLMRATSPYVYDQL
TTVSDHSDFLERQLFLVGSRFSVDNDFRYYMVHINNVVDNNCKYNLFQGMECDRLFRLIC
KLQSIVERNDRNGTNPDWSETGDRYMLKLFRDFVFHQTDQLGAPYLDLSHIITTLNKVEA
SSHERLCLVSRDSQNVILMTYADIKQWLDSSFSHLVERHRQSRCEIQMAQQREIRQHQQQ
RQQQQQQQQQSTPLSVAETDAASGRPSSGGLLVSESS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcggccagcagacgcgcccaggcggcatctctgactactttatgtcacaaatg
ggaaccattaatgctggaggcctccgaccttcagtcatttcaggagtaacgggcaatgga
tccaactgtgccccctcagttttccccggacagaatggattgtttaaaatgaacgagcgc
tttcgcgtacccccaaaatcaaccgactctgaaagtcctttctttgggttccaaactcca
actcctggtcagtcggcttccagagtgctctctaatctacaggattcgaatcagatgtct
ttcaacaaccaactttcgtctgacttatgctcacctttcgtatctggtcgctttggtagc
gccggtggtgacaattttcattctgaagacgccattggtcatgttaatgagggtcatgca
gaactttcccacctcccaacaactacgagtagtcttgacaatatattgtctatacctcct
tcgtactcatctatcctcccctcacctggcaagtccaacccacaggctgctttccagtcg
tctgcggccgctaacccaaatctaaatatgcctgttgtcgaggcttcgattgaactgcga
ccagatgggaaggttccaaatttgggccattctcgccccggtctaaccacacagtattat
accagtcagcaattcaattcggcgcgtgatcttcaagcttctggtaatcttaaagcagcc
aactggatcctggttcctccggttcccgagggaactgctgcgcatatgcgtactggcagg
gtgcatgaactgaaatctcgcgcatgtaccgatcgtgtattcaacgcgtcctatatggat
catgaactcaagcaggttctacacaacaaggttcaagcatgtcttttcaccagtgatgag
gcgaccagagagattgccaagcgatttgtccgcactttacgcggcccaggaaagcgtagg
gagaaacgactccggacgagtgcttggtcggaatccgcaaatatgttccagaatgaccgg
cattcggttattgatccgcagtgtgatcgatctgagtgtgtggccgacatgctgttggag
gacatcataaggccagacgacttcggctgtttcgaaaaactccctcgcaatttgggtgca
tacacagacttggtacctctcgaagtgatgcaacagcctcgtgtgtctgtgacgtttgga
cttccttgtgtctgtttcaaagcttggtctccacggtttggtcgaccgatgcttctacgt
cgggtaattcttcccgtggaccacgaggccgccttatctccagatgcatatcttctcgca
aaacagttatctgagttggatcatccggcggtggtaggatttcgtgacgtctttttcacc
aacgccttcaacgacaattccgctgtggttgtgtacgaatacactccgtgttcctccacg
ctacagcaaactcacatgagtgatccgatgaaactcacaagcttcagttcaccttttaac
atcagtcgaacagtgcgaccccacagcgctctcaaaagtggtccatccgatttgggaatg
cttccggaaaccacattgtggtcctacctggttcagctagtccatggaattcgattcata
catcaacaagttcatcgagcctgtggcattttagatcccacgaaagtcctaatacaagat
ggaacacgcctacgtatcaactgcttcggactaaaagatatcctgttccatcaatctcag
gatcccaaccttgctgaagatcaagctggtgatttcgtgcaattggggaagcttctcgtg
ggggcagcctgcggtactgctgaagccattcagacgaaccaacgagtgacatcattcaac
ttgttgcagcgtacttacagaccggaaatggtcacgcttctgcgcggtctgatctcggga
cagattactggtgtggatcaactaatgcgggccacatcaccgtacgtgtacgaccagctc
acgacagtgtcagaccactctgactttctcgaacgtcaactcttcttggtcggttcgaga
ttcagtgtcgacaatgattttcggtactatatggtacacataaacaatgtggtggacaat
aattgtaaatataacctttttcaggggatggagtgcgaccgattgttccgactaatctgc
aagttgcagtctattgtcgaacgaaatgatcgtaatggcacgaatccggactggtcggaa
actggagatcgatacatgctaaagctgttccgggattttgtattccatcaaacagatcag
ctgggtgctccgtatttggacttatcgcatatcatcacgaccttaaacaaggttgaagcc
agttctcatgagcgcctctgtctcgttagccgtgatagtcagaacgtcatactgatgacg
tatgccgatatcaagcaatggctggactcgagtttctcccatttggtcgaaaggcaccga
caaagccgttgtgaaatccaaatggcacaacaacgggaaatccgacagcatcagcagcaa
cgccaacaacaacaacaacaacagcagcagtctactccgctttctgttgcagaaaccgac
gcagccagtggaaggccttccagtggtggattgcttgtctcagagagttcatag
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integrated database retrieval system
