Opisthorchis viverrini (Southeast Asian liver fluke): T265_11500
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Entry
T265_11500 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T265_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_11500
Enzymes [BR:
ovi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
T265_11500
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T265_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
K_channel_TID
Glyco_hydro_99
Acetyltransf_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
20325668
NCBI-ProteinID:
XP_009176434
UniProt:
A0A074ZXA2
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MTSVHQDQAILLFIQPLSTQLQTNDTITFSQADISNGSVHAPSSDSVLGSPSSKDVERFN
GLTEEDVKDKVLPDHLKEGLDIVIVGINPSLASASVGHHYAGPGNHFWTCISQAGLVPEM
VTCYDDERMLDYGIGFTNVCTRPTKGAAELTRKEMKAGAAIMLEKMRKYRPKIAVFNGKG
IYEAYVGHKNFSMGRQPTTLDGTDTTIFVMPSSSARCAQLPRAEDKLPFFVALRKLRDYI
RGDLSELPDSEVVFADYTEFRVTQPDPKSLRKAERRRKRKAEAAAAAAAAAAAAISGGGS
VDGGMVNGSMVSASLMLDSMTGVISKPTATNGIPDGKNRSKSKNAKRNRPSGGLPESGIS
QALPNQSVSTIALTTEAQLQQQQQLQQFQQQQQQQQAYLLQQQLQQQYSLPVTQHATLQP
AQQQMLVSGGQLMSASPMVTLSMSACPTAATIPMHPGWFS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgtccaccaggaccaggccattttactctttatacaaccactcagtacacaa
cttcaaacaaatgacacaataacgttctcgcaagcagatattagtaatggcagcgttcac
gcaccatctagtgacagtgttctcgggtccccatctagtaaagatgttgagaggttcaac
ggtcttacagaagaggatgtcaaggataaggttttgccggaccatttaaaagaaggcttg
gatattgttatcgttggtatcaaccctagcttagcttccgcatctgtcggccatcactac
gccggtcctggcaaccacttttggacttgtatttcacaagccggtctagtcccagaaatg
gttacctgctacgatgatgagaggatgttggattacggtattggattcacaaacgtttgt
actagaccgactaaaggcgcggctgagcttaccaggaaggaaatgaaggctggtgcagcg
ataatgttggagaagatgagaaagtacaggccaaaaatcgctgtcttcaatgggaaaggt
atttacgaagcatacgtgggacataaaaatttcagcatgggtcgacaacctacaactctt
gatggaacggatacgacaattttcgtcatgccttcctcgagcgctcgttgtgctcagctg
cctagagccgaagacaagctgcctttctttgtcgctcttcgcaaactgcgggactacatt
cggggtgacctgtctgaacttcccgattccgaggtggtgtttgccgactataccgagttt
cgcgtcacgcagcccgacccgaaaagtcttcgtaaggcggaacgaagacgaaaacgtaag
gcagaggcagcggctgccgcagcagcagcggcggcggcggcaatctctggtggtggctcg
gtcgatggaggaatggtgaatggttcaatggtctcagcttcgttgatgttggactcaatg
acaggtgtaatctccaagccaacggcaacgaatggtatccctgacggaaaaaacagatcc
aaatcaaagaatgctaagcgcaatcgaccttccggtggtctccctgaatctggtatctcc
caagctctacccaaccaatccgtttcaaccatcgcacttaccacagaagcacaactacaa
cagcaacagcagctgcaacagttccagcaacagcaacagcaacaacaagcatatctcctc
caacaacagctccagcaacaatactcccttcctgtcactcaacatgcaactctacagcca
gctcaacagcagatgcttgttagtggcggccagctcatgtccgcgtcgcccatggtaacg
ttatccatgtctgcctgcccaactgctgctactatccctatgcatccaggttggttttca
tga
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