Opisthorchis viverrini (Southeast Asian liver fluke): T265_13477
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Entry
T265_13477 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_13477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_13477
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
T265_13477
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
T265_13477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
20327644
NCBI-ProteinID:
XP_009167322
UniProt:
A0A075AGP7
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
RESTVKTQFHLRPLFSPRRWVSRTVHILFKVTGIKKISVDFIDKLSSQTGVYQMCTSYGR
NRTALFSTGPSSTVGAPSFSDMAAFCPSGYSSRPGSSQHNGDVLNPATGAFSLRPGYSNT
ADTNPEDVSSYFNAIGYNGGQSCPPRNFSEPSLFPSLSVINRTMGHDLGGSRIVGAGTST
RPTSESLATNNTRTSGNLFSSGLTSEPGTTNTSLTSSSSRGVKLDPAEFPPILTAVGRGG
SSSLGGTFHASSNQPPLRNYVSVMSKGSLGSDSGASPISQFTHTVTSQATPEFSKQDFPA
LPGQHTSASNTSTSTSLSNLTAVSGTVHRSMVINPSSVTPGSCGSALGTHRTFTQASGSP
LPVGTAATSVNAVSMGSGIQLLPNHLVANIPKNMICDQFGMVGLLKLIRVGDYDTTLNML
APGLDLSTLHNNWQSPGELHSTFVSPCHDSCIGRPQDMDYAVPPEYLIRHLIADRLPDPP
MDQLSEETLFWLFYNCCREEAQLVVAKELYQREWRFHKKEQIWLTRIMGANFTTDSNSEQ
GEYYFWDPFKAQKSTHQMTILYSDLDDAPAAFRVSSNTLSAFVGIGHPMGAASGSHHITG
SHSQTNLQQQHLVNYQQAFPHSQSQAMLNRHQVTGGVSISSTASHQPGSQLVSAQGGSGS
ASAATLASLFNARTQSKPAQLSPTASYFQPLPPHTRSVAVAPLFASRSLAGGVVQSNTPS
VSPATTLCSVPVTSSTAAASNSSCVSSTNVTHSLTAVDSNHTNDSAQNRTSNSLGGVEDS
GGLQSKFESSHL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
cgggaatccactgttaagacccagttccatcttcgccctttgttctctccacggcgttgg
gtttcccgtacagtccatattctgttcaaagtgaccggcataaagaaaatttctgtggat
tttattgataagctttcttcacagactggcgtataccagatgtgtacctcctatggcagg
aataggacagctcttttcagtactggtcctagcagtactgtaggtgcgccgtctttcagc
gacatggccgccttttgtccctccggttacagctccagacctggttcctcgcagcacaat
ggggacgtactgaaccctgcgaccggtgctttttctttacgacctggatactccaataca
gcagatacaaatcctgaagacgtttcctcctatttcaacgcgatcggatacaatggtgga
cagtcttgtcctcctcggaatttttctgagccatcgttgtttccttctctgtccgtcatt
aatcggacgatgggacatgacctgggtggtagccgcattgttggtgcgggaacttcaaca
agaccaacaagtgaatctttggcgaccaacaatactcgaacctctggcaaccttttttct
tcgggtttaaccagcgaacctgggacgactaacacgagtttgacttcctcatcctcgaga
ggcgtcaagttagatcctgctgaatttccccccatcttgactgccgttggtcgcggtgga
agtagttcacttggtggaacgttccatgcctcttcgaatcaacctcctctccgtaattat
gtttctgtaatgtcgaaaggatcactcgggtcggactcaggcgcaagccctattagtcaa
ttcactcacacggtcacaagccaagccactcctgagttttcaaagcaagattttccggct
cttccaggccagcatacttctgcatctaatacttccacctccacgtcattgtcaaatctg
accgctgtctctgggacagtacataggtccatggtgattaatccgtcctccgttactccc
ggttcttgtggaagcgcactgggcacacatcggacgttcactcaagcatctggatcacca
ctgcccgtaggaacggctgcaacatcagtgaatgccgtatccatgggttctggtatccag
cttttgccaaaccaccttgtggcaaatattccgaaaaatatgatatgcgatcagttcggt
atggtgggcttattgaagctgattcgagtaggagactacgatacgacgttgaatatgtta
gctccgggtctggacctttcaactttacacaataactggcaaagtccaggcgaactacat
agtacgtttgtttccccttgtcatgattcgtgtattggtcgaccacaagacatggattat
gctgttccgcccgaatatcttattcgacatctaatcgccgaccgcttaccggatccaccg
atggatcagttgtctgaggagacgttgttctggttattttacaattgctgcagagaggag
gcgcagttggttgtagcgaaagaactttaccaacgcgaatggcggttccataaaaaagaa
caaatctggcttactcggattatgggtgcgaatttcacaacggacagtaattcagagcaa
ggagagtactatttctgggacccattcaaggcacagaagtccactcaccaaatgactatt
ctttactcggacttggatgatgcaccggccgcgtttcgtgtgagttcgaataccttgagt
gcgtttgttggtatcggacatccgatgggagcagctagtggatcacatcatatcactgga
tctcattcacaaacgaatttacagcaacaacaccttgttaactaccaacaggcgtttccg
cattcccagagtcaggctatgttgaatcggcatcaagtcaccggcggcgtgtccatttcg
agcacagcctcgcatcaaccaggttcacagttggtaagcgcacaaggtggatctggctca
gcctctgctgctacactagccagcttatttaatgcgcggacccaatcgaaaccggcgcag
cttagtcccacagcaagttactttcaaccactacctcctcacactcgaagcgttgccgtg
gcccccttgtttgcgtcgcgatcactagcgggcggtgtagtacagtcgaacacgccgtca
gtatcgcctgcgactactctatgttccgtgcctgtgacgtcgagcactgcagctgctagc
aactctagttgtgtttcatccacgaacgtaacccacagtttgacggcggtggactcgaac
catacgaacgattctgctcagaatcggacatcaaattcgttaggcggcgtcgaggattct
gggggcttgcagtctaaatttgaatcgtcccacctctag
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integrated database retrieval system
