Oxynema aestuarii: HCG48_15155
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Entry
HCG48_15155 CDS
T06528
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oxy03400
]
HCG48_15155
DNA repair and recombination proteins [BR:
oxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HCG48_15155
Archaeal homologous recombinant proteins
HCG48_15155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_29
AAA_27
AAA_21
RsgA_GTPase
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QIZ71759
UniProt:
A0A6H1U2B2
LinkDB
All DBs
Position
3731589..3734639
Genome browser
AA seq
1016 aa
AA seq
DB search
MRPLQLSLEGFTSFRREQNLDFTELDLFAITGATGAGKSSLLDALTYALYSTTARTKQVA
ELVSQGAETLKVRLCFAVLGSSYRVTRRWRYRPSTPVTKVLLEKQLADGSWETLESKERA
ANKAIAEILGMDFDTFTRAIVLPQNQFDEFLKGNTAKRREILRQLAGFEIFEKMRKQTND
LSRSLKQEVAALERQIAELEVPETVEVELKRSQLAQLEADFPQFSREARQAQVLLDEEER
LFAQIVKLRKVREQLEELEGRSPEIEGTIARLDRAIAAHELQGDWALVREIRQQVKTASS
ALQSASKRLVQVERQVELKQSELDAERARQAEILPQLQAREAAIASAKVYEEQRQQLERD
LAIAEKQEKEKQKQLKEAQKQLKEAQDRFDRAEAVLKQADRQLEGLAPGGERLTQLQAIA
PLLVEWGLVRQQLERSRQQCDRAIAERETAQGELAGARSRQEEAANRLQDARKAVEGAER
QNLDIGRSNHAAALRMSLQPGDTCPVCGGVHPEAAALPPLTEQAPIDLAPLRSREAKAQQ
GLQAAQTELSKAEANLDRCRQRQEEMEEQRESNAREEARLRAEIASVLGMGQDEALEVAP
LQAEREALEARDAEYREGLAAQEKAAAQRSQAEQGLEFARRGDRAAQAEATAATEARDRA
REGVERVRAKLLELTEGKAYEVLVQALERDKQALGDRLQAAESAYQAVNTQLIQGRENVQ
QAQSTLQGAIAKQEESEATWGERLEAANFDEESFLGAVASAGDRAAWQQAIADYREMKVE
LNTRVRDLAETIGDRTTDERAIGDRRQAKQEAEKLLAEAQERRVELGTWLQDADRKLEQG
DRLTQTLETVSATYETYHTLAQSLKSNEFQAYILEHLEAELVDRATLLLRELTDARYTLR
MEEGEYWVEDNWNGGELRRVRTLSGGETFAASLSMAIALSEKLSMGAELGSLFLDEGFGT
LDGETLESVTHILESLRQQNRLIGIITHVKSLGERLPTQVKVYKSPQGSRLEIERL
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctttacaactttctctagaaggttttaccagttttcgccgagaacaaaatctc
gattttaccgagttggacttgttcgcaattaccggggcgacgggggcggggaaatcttcc
ctactggatgccctgacttatgcgttatatagcacgacggcgcgcaccaagcaagttgcg
gaattggtcagtcagggggcggaaactttaaaagtgcgattgtgctttgccgttctcgga
agttcgtatcgagtgacccggcgctggcgctaccgaccgagtaccccggtcacgaaggtg
ttgttagagaaacagttggcggatgggagttgggaaaccctcgaaagcaaggaacgggcg
gcgaataaggcgatcgcggagattctcgggatggatttcgatacgtttacccgggcgatc
gtcctgccgcaaaatcaatttgacgagtttttaaagggaaatacggcaaaaagacgggaa
atcttgcgtcagcttgctggatttgagatcttcgagaaaatgcgcaaacaaacgaacgat
ctatcccgatcgctcaaacaagaagtcgccgcgttggaacgacagatcgccgagttggag
gttccggaaacggtagaggtggagttgaagcgatcgcaactcgctcaattggaggcggat
tttccgcaattttcccgagaagctcgacaagctcaagtgcttttagatgaagaagagcgc
ctattcgctcaaattgtaaaattgcgaaaagtacgcgagcaattggaggagttggagggg
cgatcgcccgagatcgaagggacgatcgcccgcctcgatcgcgcgatcgccgcccacgaa
ttacaaggggattgggcgttagtgagagaaattcgccaacaagtgaaaacggcaagtagt
gcgctacagtccgcatcgaagcgcttagtacaagtagagcgacaagtcgagctgaagcaa
agtgagttagacgccgaacgcgcgcgccaagcggaaatcttgccccaattgcaggctcgc
gaagcggcgatcgcctcggcgaaggtttacgaagaacaacggcaacagttagagagagac
ctggcgatcgcggaaaaacaggagaaagagaagcagaaacagttaaaagaagcgcagaaa
cagttaaaagaggcgcaagatcgcttcgatcgcgccgaggctgttttaaaacaagccgat
cgtcaattagaaggtctggcgcccggcggggaacggttgacccagttgcaggcgatcgcg
ccgttactggtggaatggggcttagtgagacagcagctcgaacgatcgcggcaacagtgc
gatcgcgcgatcgccgaacgagagacggcgcaaggggaattagccggagcgcgatcgcgg
caggaggaggcagccaaccgcttgcaggatgcccgcaaagccgtggaaggagcggaacgg
cagaatctcgacatcgggcgatcgaaccatgccgccgcattacgcatgtctttacaaccc
ggggatacctgtcccgtgtgcggcggcgtccatccggaagcggcagccttgccgccttta
acggaacaagccccgatcgatctcgcgccgttgcgatcgcgcgaagccaaagcgcagcaa
gggttacaagcggcacaaactgaactgagcaaggcggaagcgaacctcgaccgttgccgc
cagcgccaagaagaaatggaggaacaaagagagagcaacgcacgggaagaagcccgcttg
cgcgccgaaattgcctcggtgttggggatggggcaagacgaagcgctggaggtggcgccc
ttgcaggcggaacgggaagccttggaggcgcgggatgccgagtatcgcgaagggctggcg
gcgcaggaaaaggcggcagcacagcgatcgcaggcggaacagggcctagagtttgcgcgc
cggggcgatcgcgcggcccaggcggaagcgacggcggcgacggaagcgcgcgatcgcgcc
cgcgagggggtggaacgagtgcgggcgaaattgctagagttaactgagggtaaggcttac
gaggtgttagttcaagctttggaacgggacaagcaagccctgggcgatcgcctgcaagcg
gcggaaagtgcctatcaagcggtgaatacccagctcatccaagggcgagagaacgtccag
caagcacaaagtaccttacagggggcgatcgccaaacaagaggagtccgaggcgacgtgg
ggagaacggttggaggcggcaaacttcgacgaggagagctttttaggggcggtggcgtcg
gcgggcgatcgggccgcgtggcagcaggcgatcgccgactatcgggaaatgaaagtagaa
ttgaatactcgcgtgcgagatttagcggagacgatcggcgatcgcaccaccgacgaacgg
gcgatcggcgatcgtcgccaagccaagcaggaagccgaaaaactgcttgctgaggcccaa
gaacggcgggtcgagttggggacgtggttgcaagatgccgatcgcaagttagaacaaggc
gatcgactcactcaaaccttagaaaccgtcagcgccacttacgaaacgtatcacactttg
gctcaaagcctcaaaagcaacgagtttcaagcctatattttagaacatttagaagccgaa
ctcgtcgatcgcgccaccttgttactgcgcgaacttaccgacgcccgttataccttacgc
atggaagaaggggaatactgggtcgaggataactggaatggcggcgaactgcgccgagtt
cgcaccctctccggcggcgaaacctttgcggcgtcgctgtcgatggcgatcgccctttcc
gaaaaactctcgatgggcgccgaattgggcagtttattcttagatgaaggcttcggaacc
ttggacggggaaaccttagaaagtgtcacccacattttagaatccctacgccaacaaaac
cgcctcattggaatcatcacccacgtcaaatccctcggcgaacgcctccccacccaggtg
aaagtgtataaatccccccaaggatctcgcctggaaatcgaacgcttgtag
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