Paracoccus sp. AK26: FIU66_13630
Help
Entry
FIU66_13630 CDS
T08451
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paak
Paracoccus sp. AK26
Pathway
paak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU66_13630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paak03400
]
FIU66_13630
Enzymes [BR:
paak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FIU66_13630
DNA repair and recombination proteins [BR:
paak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU66_13630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QIR86164
UniProt:
A0A6G9WC27
LinkDB
All DBs
Position
complement(2743741..2745150)
Genome browser
AA seq
469 aa
AA seq
DB search
MIRVDLPRFGRFQAWRDAARQLASNRVSPTDVTWDDGGLFGSDPVPPPGPQPVTASKDFL
DLARTVASHSDPERWALLYTALMRLQDDRGFIANPADPLTDRLGRMAKSVRRDIHKMHAF
VRFHELPAQGPRRSFGAWFEPEHPILEAATPFFAKRFADMDWLIATPEGTARFDGTITYD
PPADRPNLPEDASHDLWQTYFANIFNPARIKTQAMRSEMPVKYWKNLPETGLIAQMLADA
PRRVQAMRDAGASTAPGFAAKVTARIRQAPDESMPQDMDSAGRQASRCTRCDLCHAATQT
VWGKGNSAAPLMIVGEAPGDQEDLQGLPFVGPAGQLLHRTMEQAGLDARRVWMTNAVKHF
KFTPRGKRRIHQTPNVSEIKHCRWWLDLERGFVQPRLTLAMGATAAFALTGNNRPLTPRR
GQVERALDGGPVLLTWHPSLILRLDGDRAAEAQKQFAQDLAQARQMIAA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcgtcgacctgccccgtttcggccggttccaggcttggcgcgacgcggcgcgg
cagcttgcatcgaaccgcgtcagcccgaccgacgtgacctgggacgacgggggcctgttc
gggtccgatcccgtgccgccgcctggtccgcagccggtcaccgccagcaaggatttcctg
gacctcgcccgcacggtcgccagccattccgatcctgaacgctgggccttgctgtacacc
gcgctgatgcgcctgcaggacgaccgcggcttcattgccaaccccgccgatccgttgacc
gaccggctggggcgcatggccaagtcggtgcgccgcgacatccacaagatgcacgccttt
gtccggttccacgaactgccagcccagggtccgcgccgcagcttcggcgcctggttcgaa
ccggaacatccgatcctcgaggccgcgacgccgttcttcgccaaacggtttgccgacatg
gactggctgatcgccacgcccgaaggcactgcccgctttgacgggacgatcacctatgac
ccgcctgcagaccgcccaaacctgcccgaggacgccagccacgatttgtggcagacctat
ttcgccaacattttcaaccccgcccggatcaagacccaggccatgcggtcggaaatgccg
gtgaaatactggaagaacctgccggaaaccgggctgatcgcgcagatgctggccgatgcg
ccgcgccgggtgcaggcgatgcgggatgccggggcctcgaccgcgccgggtttcgcggcc
aaggtcacggcgcggatccgccaggcgcccgacgaaagcatgccccaagacatggacagc
gccggccggcaggcaagccgctgcacgcgctgcgacctgtgccatgcggctacgcaaacg
gtctggggcaagggcaattccgccgcgcccctgatgatcgtgggcgaggcgcccggcgat
caggaggatctgcagggccttcccttcgttggaccggcaggccagcttctgcaccggacg
atggaacaggctgggctggacgccaggcgtgtctggatgaccaatgcggtcaagcacttc
aagttcacaccgcgcggcaagcgccgcatccaccagacccccaacgtatccgagatcaag
cactgccgctggtggctggatctggaacgcggcttcgtgcagccccggctgacgctggca
atgggggccacagcggcctttgcgctgacgggaaacaaccggccgctgacgccgcggcgc
gggcaggtggaacgggcgctcgatggcgggccggtgctgctgacctggcaccccagcctg
atcctgcggcttgacggcgaccgcgcggccgaggcgcagaaacagttcgcgcaggatctg
gcgcaggcccgccagatgatcgcggcctga
DBGET
integrated database retrieval system
