Pyrococcus abyssi: PAB0881
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Entry
PAB0881 CDS
T00024
Symbol
serS
Name
(GenBank) serS seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pab
Pyrococcus abyssi
Pathway
pab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAB0881 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pab01007
]
PAB0881 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pab03016
]
PAB0881 (serS)
Enzymes [BR:
pab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PAB0881 (serS)
Amino acid related enzymes [BR:
pab01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PAB0881 (serS)
Transfer RNA biogenesis [BR:
pab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PAB0881 (serS)
Prokaryotic type
PAB0881 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
bZIP_1
UvrB_inter
TMF_TATA_bd
HAUS-augmin3
FapA
TPR_MLP1_2
DUF4164
Motif
Other DBs
NCBI-ProteinID:
CAB50241
UniProt:
Q9UZ21
LinkDB
All DBs
Position
1290539..1291906
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AA seq
455 aa
AA seq
DB search
MLDIKLIRENPELVKNDLKKRGELEKIKWIDEILKLDAEWRAKLKEINKLRHERNKIAIE
IGKRRKKGEPVEELLAKSKEIVKRIESLEKEVEELKKKIDYYLWRLPNITHPSVPIGESE
EDNVPIRFWGKARVWEGHLERFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFARAAKV
SGSRFYYLLNEIVILDLALIRFALDELIKKGFTPVIPPYMVRRFVEEGSTTFEDFEDVIY
KVEGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTKGIFRVH
QFHKVEQFVYSRPEESWEWHERIIRNAEELFQKLEIPYRVVNICTGDLGYVAAKKYDIEA
WMPGQGRFREVVSASNCTDWQARRLNIRFRDRTDEKPRYVHTLNSTAIATSRAIVAILEN
HQEEDGTVKIPKVLWKYTGFKEIVPVEKKERCCSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctggacataaagctcatacgtgaaaatcccgagctcgtgaagaacgatctaaaaaag
aggggagaacttgaaaagataaagtggatagacgagattctaaagttggacgctgagtgg
agggccaagctaaaggaaataaacaaactcaggcatgagaggaataaaatagccatagaa
ataggaaagaggagaaagaaaggagagccagtcgaagagcttctagctaagagcaaagag
atagtgaaaaggatagaaagtctggaaaaggaagttgaagagctcaagaagaagattgac
tattacttatggaggcttcccaacataacacatccaagcgttcccataggagaaagcgaa
gaggataacgtcccaattagattctgggggaaagctagggtctgggaaggtcacctagag
agattcctggagcagagccaggggaaaatggagtacgaggttctcgagtggaggccgaag
ttgcacgttgacctgctcgaaatcctaggaggagcggactttgcaagggcagccaaggtt
agcggctcgaggttctactacctcctaaacgagatagttatactggacttagcgttaatt
aggttcgccctcgatgagctcataaagaagggcttcactccagtaatcccaccttacatg
gttagaagattcgtggaggagggctcaaccaccttcgaggatttcgaggatgtcatatac
aaggttgaaggtgaggacctatacttaatcccgaccgctgagcatcctttagctggaatg
cacgcaaatgagatcttagatggaaaggatttaccgctcctctacgttggaatatcgcct
tgcttcaggaaagaggcgggaactgcaggaaaggataccaagggaatattcagggttcac
caattccacaaggttgagcagttcgtgtactctaggcctgaggagagctgggagtggcac
gagaggataataaggaacgccgaggaactcttccagaagctcgagataccgtatagggta
gtgaacatatgcactggagaccttggctacgtggcggctaagaagtacgatatagaagct
tggatgcctggtcaaggaagatttagggaagtagtttcggcaagcaactgtaccgattgg
caagctagaaggctcaacataagatttagggatagaacagatgaaaagccacgctacgtt
cacaccttaaattcaacggccatagcaacttctagagcgatagttgcgatacttgagaac
catcaagaggaagatggaaccgtgaagattccgaaggttctctggaagtacaccggcttc
aaggaaatagttcccgtagagaagaaggagaggtgttgctcaagttga
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