Pyrococcus abyssi: PAB1868
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Entry
PAB1868 CDS
T00024
Name
(GenBank) Cleavage and polyadenylation specficity factor
KO
K07041
uncharacterized protein
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
PAB1868
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
KH_7
RMMBL
Lactamase_B_6
Lactamase_B
Lactamase_B_2
KH_2
KH_1
KhpA-B_KH
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
CAB49663
UniProt:
Q9V0P0
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Position
complement(702963..704918)
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AA seq
651 aa
AA seq
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MSALIKRETQVDQILKDIRGIVNQMVPREAKITEIEFEGPELVIYVKNPEAIMKDGELIK
DLAKVLKKRISIRPDPDVLLPPEEAEKLIFEIVPKEAEITNIAFDPSVGEVLIEAKKPGL
VIGKNGETLRLITQKVKWAPKVVRTPPLQSQTIYSIRQILQSESKDRRKFLRQVGRNIYR
KPEYKSRWIRITGLGGFREVGRSALLVQTDESYVLVDFGVNVAALNDPYKAFPHFDAPEF
QYVLKEGLLDAIIITHAHLDHSGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQ
SNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGNGLH
NIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHQTL
KRGGKVLIPAMAVGRAQEVMMVLEDYARIGAIDAPIYLDGMIWEATAIHTAYPEYLSRRL
REQIFKEGYNPFLSEIFHPVANSKERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPD
PRNSIIFVSYQAEGTLGRQVQSGVREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRREL
MNYVAKVRPRPERVITVHGEPQKCLDLATSIHRKFGLSTRAPNNLDTIRLR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcattgataaaaagggagacccaagtagaccagatacttaaggatattcgtgga
attgtcaaccaaatggtaccaagggaagctaagataactgaaatagaatttgaagggccc
gaattagtaatttacgttaaaaaccccgaagcgataatgaaagatggcgagttaataaaa
gatttagccaaagttttgaagaagaggattagcatcaggccagatccagatgttctgctt
ccgcctgaagaggctgaaaagttaatatttgagatagtgcctaaggaagctgaaataacg
aatatagccttcgacccatccgttggagaagttctaatagaggccaaaaagccggggctc
gttatagggaagaatggggaaactttaaggttgataactcagaaagttaagtgggcaccg
aaagtcgtcagaacaccgccacttcaaagccaaacgatatattcaatccgtcagatcctt
cagagcgagagcaaagataggaggaaattcttaagacaggtgggtaggaacatctataga
aagcccgagtacaagagtaggtggattaggattactggacttggaggatttagagaagtt
ggaaggagtgcccttctagttcaaaccgatgagagttacgttctcgtagattttggtgtt
aacgttgccgcacttaatgacccctacaaggcattcccacactttgatgcccccgagttc
cagtacgtccttaaagagggtttgctagatgcaataataataacccacgctcacttggat
catagcggaatgttaccatacctatttaggtacaacctcttcgacggtccaatatataca
accccgcccacgagggacttgatggttctccttcagaaggacttcatagagattcagcag
agcaatggccaagacccactctatagaccgagagatataaaagaagttataaaacacaca
ataactcttgattatggagaagttagggatatttcgcccgatataaggctaacgttgcac
aatgccggccacattctcggctcggccatagttcacctacacattgggaatggtctccat
aacatagcgataacgggagacttcaagttcatacctacaaggttacttgagccagctaat
gcaaagtttccaagacttgaaaccttagttatggaatcaacatatggtggcgctaacgat
atccaaatgccaagggaagaagctgagaaaaggctaatagaggtaattcaccaaacttta
aagcgtggtggaaaagttctaattcctgcaatggccgttggaagagcccaggaggtaatg
atggttctagaggactacgctaggataggagctatagatgccccaatataccttgacggg
atgatctgggaagctaccgcgatacacacagcatatcctgaatacctgagtaggagacta
agggagcagatattcaaggaaggctacaatccgttcctaagtgagatattccacccagtc
gcgaactcgaaggagagacaagacataatagatagtaacgaacccgcgattataatagca
tcttcgggcatgctcgttggaggacccagcgttgagtacttcaaacaactggctcccgat
cccaggaacagcataatatttgtgagctatcaggcagagggaactctaggtaggcaagtt
caaagtggtgtaagggaaatacccatggttggggaggaaggaagaacagaggtaattaaa
gtcaacatggaggttcacacaatagatggattctctggtcatgcggataggagggaactt
atgaattacgttgcaaaagttagacccaggccagagagggtaataacggttcatggtgag
ccccagaagtgcttagacttggctactagcattcacaggaaatttgggctttcaactagg
gctccgaataaccttgacacaataaggctgaggtga
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