Polycladomyces abyssicola: JIR001_18650
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Entry
JIR001_18650 CDS
T07192
Symbol
trmFO
Name
(GenBank) methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabs03016
]
JIR001_18650 (trmFO)
03036 Chromosome and associated proteins [BR:
pabs03036
]
JIR001_18650 (trmFO)
Enzymes [BR:
pabs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
JIR001_18650 (trmFO)
Transfer RNA biogenesis [BR:
pabs03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
JIR001_18650 (trmFO)
Chromosome and associated proteins [BR:
pabs03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JIR001_18650 (trmFO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
NAD_binding_8
Pyr_redox_2
DAO
3HCDH_N
AlaDh_PNT_C
IU_nuc_hydro
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCU82082
UniProt:
A0A8D5ZNL9
LinkDB
All DBs
Position
complement(1843796..1845115)
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AA seq
439 aa
AA seq
DB search
MPKQPVNVIGAGLAGSEAAWQIAQRNVPVRLYEMRPVKRTPAHRGGDFAELVCSNSLRSN
ELTNAVGILKEEMRRLDSLIMRCADQHAVPAGGALAVDREAFSAAVTAALHNIPHVEIIH
EEVTEIPEGITVVATGPLTSAALSEKLKALTGEEYLYFYDAAAPIVEKESIDMDKVFVAS
RYGKGEAAYLNCPMTEEEFDRFYEALVTAETAPLKEFEKEIYFEGCMPIEVMAKRGKKTL
LFGPMKPVGLVDPRTGKQPFAVVQLRQDNSAGTLYNLVGFQTHLKWGEQKRIFRMIPGLE
NAEIVRYGVMHRNTFINSPKVLKPTYQFRDRDDLFFAGQMTGVEGYVESAASGLIAGINA
ARLAMGQEPVVFPHETVIGSLARYITTADPDNFQPMNANFGLLPPLPQRIRAKKERNLKI
AERALERLQAFSDELYAFS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacaaccggtaaatgtgatcggcgccgggctggcggggagcgaagcagcgtgg
cagatcgctcaacgcaatgtgccggttcgtttgtacgagatgcggccggtcaaacggaca
ccggcgcacaggggaggcgatttcgccgagctggtatgcagcaactcgctccgttccaat
gaattgaccaatgccgtgggtatattaaaagaagaaatgcgtcggttggactcgctgatc
atgcggtgtgccgaccaacacgccgttcccgccggcggtgcgttggccgtagatcgtgag
gcgttctccgccgcggtgacggcggcattgcacaatatcccccacgtggagatcatccat
gaagaagtgacagagattcccgaagggatcaccgtggtcgcgacgggaccgcttacttcc
gccgccctgtcggagaaactgaaagcattgaccggtgaggagtatttgtatttctacgac
gcggcggcgccgatcgtggaaaaagagagcatcgacatggacaaggtttttgtcgcttcc
cgctacggcaagggggaagctgcctacctcaactgtccgatgaccgaagaagaattcgac
cggttctatgaagcactggtcacggcggagacggccccgctcaaggagtttgagaaagaa
atttactttgagggatgcatgccgatcgaagtgatggccaaacggggcaaaaaaaccttg
ttgttcggtccgatgaagcctgtcgggctggtcgatccccgcaccggaaaacaaccgttt
gcagtggtccaattgcggcaggataacagtgcaggaacgctgtacaacttggtcggtttc
caaacccatctgaaatggggggaacaaaagcggatattccgcatgatcccaggtttggaa
aacgccgaaatcgtacgttacggtgtgatgcaccgcaatacattcatcaattcgcccaag
gtgctcaagcccacgtatcaattccgagatcgggatgatttgttctttgccggacagatg
accggagtggagggatatgtcgagtcggccgcctccggtttgatcgccgggatcaatgcg
gcaaggttggccatgggtcaagaaccggttgtgtttccgcatgagacagtgatcggcagt
ctcgcccgctatattaccacggccgacccggacaatttccagccgatgaatgccaacttc
gggttgttgccgccgcttccccaaagaatccgcgccaaaaaggagcgcaatctgaaaatc
gccgaacgtgcattggagcggttacaggcgttttccgacgagttgtatgccttctcttga
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