Salipiger abyssi: Ga0080574_TMP3476
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Entry
Ga0080574_TMP3476 CDS
T04681
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
paby
Salipiger abyssi
Pathway
paby00630
Glyoxylate and dicarboxylate metabolism
paby01100
Metabolic pathways
paby01110
Biosynthesis of secondary metabolites
paby01120
Microbial metabolism in diverse environments
paby01200
Carbon metabolism
Module
paby_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080574_TMP3476
Enzymes [BR:
paby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Ga0080574_TMP3476
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
APZ53810
UniProt:
A0A1P8UWR8
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All DBs
Position
complement(2874931..2875350)
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AA seq
139 aa
AA seq
DB search
MRLKQGQFSFLPDLTDDDIRTQAQYAIDNGWAVSVEYTDDPHPRNSYWEMWGHPMFDNPD
AAAVVYEVNECRKEHGGKYIRVLAFDATAGWESIRMSFIVNRPAEEPGFRVVRQEGEGRS
IRYTVESYAVREPEGARYA
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgaaacaaggtcaattcagcttcctgcccgatctcaccgacgacgacatccgc
acgcaggcgcaatacgccatcgacaacggctgggcggtctcggtggaatataccgacgat
ccgcacccgcggaattcctactgggagatgtggggccacccgatgttcgacaatccggac
gcggcggcggtggtctatgaggtcaacgaatgccgcaaggagcatggcgggaaatatatc
cgcgtgctggccttcgacgcgaccgcgggctgggaatcgatccgcatgagcttcatcgtg
aaccgtcccgccgaggagcccggcttccgcgtggtgcggcaggaaggcgagggccgcagc
atccgctacacggtggaaagctacgcggtgcgcgaacccgagggggcgcgctacgcctga
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